|
| 1 | +import numpy as np |
| 2 | +from bqplot import Figure, LinearScale, Axis, ColorScale, PanZoom |
| 3 | +from bqplot_image_gl import ImageGL |
| 4 | +from bqplot_image_gl.interacts import (MouseInteraction, |
| 5 | + keyboard_events, mouse_events) |
| 6 | + |
| 7 | +import ipywidgets as ipw |
| 8 | +import traitlets as trait |
| 9 | + |
| 10 | +# Allowed locations for cursor display |
| 11 | +ALLOWED_CURSOR_LOCATIONS = ['top', 'bottom', None] |
| 12 | + |
| 13 | +# List of marker names that are for internal use only |
| 14 | +RESERVED_MARKER_SET_NAMES = ['all'] |
| 15 | + |
| 16 | + |
| 17 | +class _AstroImage(ipw.VBox): |
| 18 | + """ |
| 19 | + Encapsulate an image as a bqplot figure inside a box. |
| 20 | +
|
| 21 | + bqplot is involved for its pan/zoom capabilities, and it presents as |
| 22 | + a box to obscure the usual bqplot properties and methods. |
| 23 | + """ |
| 24 | + def __init__(self, image_data=None, |
| 25 | + display_width=500, |
| 26 | + viewer_aspect_ratio=1.0): |
| 27 | + super().__init__() |
| 28 | + |
| 29 | + self._viewer_aspect_ratio = viewer_aspect_ratio |
| 30 | + |
| 31 | + self._display_width = display_width |
| 32 | + self._display_height = self._viewer_aspect_ratio * self._display_width |
| 33 | + |
| 34 | + |
| 35 | + layout = ipw.Layout(width=f'{self._display_width}px', |
| 36 | + height=f'{self._display_height}px', |
| 37 | + justify_content='center') |
| 38 | + |
| 39 | + self._figure_layout = layout |
| 40 | + |
| 41 | + scale_x = LinearScale(min=0, max=1, #self._image_shape[1], |
| 42 | + allow_padding=False) |
| 43 | + scale_y = LinearScale(min=0, max=1, #self._image_shape[0], |
| 44 | + allow_padding=False) |
| 45 | + self._scales = {'x': scale_x, 'y': scale_y} |
| 46 | + axis_x = Axis(scale=scale_x, visible=False) |
| 47 | + axis_y = Axis(scale=scale_y, orientation='vertical', visible=False) |
| 48 | + scales_image = {'x': scale_x, 'y': scale_y, |
| 49 | + 'image': ColorScale(max=1.114, min=2902, |
| 50 | + scheme='Greys')} |
| 51 | + |
| 52 | + self._figure = Figure(scales=self._scales, axes=[axis_x, axis_y], |
| 53 | + fig_margin=dict(top=0, left=0, |
| 54 | + right=0, bottom=0), |
| 55 | + layout=layout) |
| 56 | + |
| 57 | + self._image = ImageGL(scales=scales_image) |
| 58 | + |
| 59 | + self._figure.marks = (self._image, ) |
| 60 | + |
| 61 | + panzoom = PanZoom(scales={'x': [scales_image['x']], |
| 62 | + 'y': [scales_image['y']]}) |
| 63 | + interaction = MouseInteraction(x_scale=scales_image['x'], |
| 64 | + y_scale=scales_image['y'], |
| 65 | + move_throttle=70, next=panzoom, |
| 66 | + events=keyboard_events + mouse_events) |
| 67 | + |
| 68 | + self._figure.interaction = interaction |
| 69 | + |
| 70 | + if image_data: |
| 71 | + self.set_data(image_data, reset_view=True) |
| 72 | + |
| 73 | + self.children = (self._figure, ) |
| 74 | + |
| 75 | + @property |
| 76 | + def data_aspect_ratio(self): |
| 77 | + """ |
| 78 | + Aspect ratio of the image data, horizontal size over vertical size. |
| 79 | + """ |
| 80 | + return self._image_shape[0] / self._image_shape[1] |
| 81 | + |
| 82 | + def reset_scale_to_fit_image(self): |
| 83 | + wide = self.data_aspect_ratio < 1 |
| 84 | + tall = self.data_aspect_ratio > 1 |
| 85 | + square = self.data_aspect_ratio == 1 |
| 86 | + |
| 87 | + if wide: |
| 88 | + self._scales['x'].min = 0 |
| 89 | + self._scales['x'].max = self._image_shape[1] |
| 90 | + self._set_scale_aspect_ratio_to_match_viewer() |
| 91 | + elif tall or square: |
| 92 | + self._scales['y'].min = 0 |
| 93 | + self._scales['y'].max = self._image_shape[0] |
| 94 | + self._set_scale_aspect_ratio_to_match_viewer(reset_scale='x') |
| 95 | + |
| 96 | + # Great, now let's center |
| 97 | + self.center = (self._image_shape[1]/2, |
| 98 | + self._image_shape[0]/2) |
| 99 | + |
| 100 | + |
| 101 | + def _set_scale_aspect_ratio_to_match_viewer(self, |
| 102 | + reset_scale='y'): |
| 103 | + # Set the scales so that they match the aspect ratio |
| 104 | + # of the viewer, preserving the current image center. |
| 105 | + width_x, width_y = self.scale_widths |
| 106 | + frozen_width = dict(y=width_x, x=width_y) |
| 107 | + scale_aspect = width_x / width_y |
| 108 | + figure_x = float(self._figure.layout.width[:-2]) |
| 109 | + figure_y = float(self._figure.layout.height[:-2]) |
| 110 | + figure_aspect = figure_x / figure_y |
| 111 | + current_center = self.center |
| 112 | + if abs(figure_aspect - scale_aspect) > 1e-4: |
| 113 | + # Make the scale aspect ratio match the |
| 114 | + # figure layout aspect ratio |
| 115 | + if reset_scale == 'y': |
| 116 | + scale_factor = 1/ figure_aspect |
| 117 | + else: |
| 118 | + scale_factor = figure_aspect |
| 119 | + |
| 120 | + self._scales[reset_scale].min = 0 |
| 121 | + self._scales[reset_scale].max = frozen_width[reset_scale] * scale_factor |
| 122 | + self.center = current_center |
| 123 | + |
| 124 | + def set_data(self, image_data, reset_view=True): |
| 125 | + self._image_shape = image_data.shape |
| 126 | + |
| 127 | + if reset_view: |
| 128 | + self.reset_scale_to_fit_image() |
| 129 | + |
| 130 | + # Set the image data and map it to the bqplot figure so that |
| 131 | + # cursor location corresponds to the underlying array index. |
| 132 | + self._image.image = image_data |
| 133 | + self._image.x = [0, self._image_shape[1]] |
| 134 | + self._image.y = [0, self._image_shape[0]] |
| 135 | + |
| 136 | + @property |
| 137 | + def center(self): |
| 138 | + """ |
| 139 | + Center of current view in pixels in x, y. |
| 140 | + """ |
| 141 | + x_center = (self._scales['x'].min + self._scales['x'].max) / 2 |
| 142 | + y_center = (self._scales['y'].min + self._scales['y'].max) / 2 |
| 143 | + return (x_center, y_center) |
| 144 | + |
| 145 | + @property |
| 146 | + def scale_widths(self): |
| 147 | + width_x = self._scales['x'].max - self._scales['x'].min |
| 148 | + width_y = self._scales['y'].max - self._scales['y'].min |
| 149 | + return (width_x, width_y) |
| 150 | + |
| 151 | + @center.setter |
| 152 | + def center(self, value): |
| 153 | + x_c, y_c = value |
| 154 | + |
| 155 | + width_x, width_y = self.scale_widths |
| 156 | + self._scales['x'].max = x_c + width_x / 2 |
| 157 | + self._scales['x'].min = x_c - width_x / 2 |
| 158 | + self._scales['y'].max = y_c + width_y / 2 |
| 159 | + self._scales['y'].min = y_c - width_y / 2 |
| 160 | + |
| 161 | + def set_color(self, colors): |
| 162 | + # colors here means a list of hex colors |
| 163 | + self._image.scales['image'].colors = colors |
| 164 | + |
| 165 | + |
| 166 | +def bqcolors(colormap, reverse=False): |
| 167 | + from matplotlib import cm as cmp |
| 168 | + from matplotlib.colors import to_hex |
| 169 | + |
| 170 | + # bqplot-image-gl has 256 levels |
| 171 | + LEVELS = 256 |
| 172 | + |
| 173 | + # Make a matplotlib colormap object |
| 174 | + mpl = cmp.get_cmap(colormap, LEVELS) |
| 175 | + |
| 176 | + # Get RGBA colors |
| 177 | + mpl_colors = mpl(np.linspace(0, 1, LEVELS)) |
| 178 | + |
| 179 | + # Convert RGBA to hex |
| 180 | + bq_colors = [to_hex(mpl_colors[i, :]) for i in range(LEVELS)] |
| 181 | + |
| 182 | + if reverse: |
| 183 | + bq_colors = bq_colors[::-1] |
| 184 | + |
| 185 | + return bq_colors |
| 186 | + |
| 187 | +""" |
| 188 | +next(iter(imviz.app._viewer_store.values())).figure |
| 189 | +""" |
| 190 | + |
| 191 | + |
| 192 | +class ImageWidget(ipw.VBox): |
| 193 | + click_center = trait.Bool(default_value=False).tag(sync=True) |
| 194 | + click_drag = trait.Bool(default_value=False).tag(sync=True) |
| 195 | + scroll_pan = trait.Bool(default_value=False).tag(sync=True) |
| 196 | + image_width = trait.Int(help="Width of the image (not viewer)").tag(sync=True) |
| 197 | + image_height = trait.Int(help="Height of the image (not viewer)").tag(sync=True) |
| 198 | + zoom_level = trait.Float(help="Current zoom of the view").tag(sync=True) |
| 199 | + marker = trait.Any(help="Markers").tag(sync=True) |
| 200 | + cuts = trait.Tuple(help="Cut levels").tag(sync=True) |
| 201 | + stretch = trait.Unicode(help='Stretch algorithm name').tag(sync=True) |
| 202 | + |
| 203 | + def __init__(self, *args, image_width=500, image_height=500): |
| 204 | + super().__init__(*args) |
| 205 | + self.image_width = image_width |
| 206 | + self.image_height = image_height |
| 207 | + self._astro_im = _AstroImage() |
| 208 | + |
| 209 | + # The methods, grouped loosely by purpose |
| 210 | + |
| 211 | + # Methods for loading data |
| 212 | + # @abstractmethod |
| 213 | + # def load_fits(self, file): |
| 214 | + # raise NotImplementedError |
| 215 | + |
| 216 | + def load_array(self, array): |
| 217 | + raise NotImplementedError |
| 218 | + |
| 219 | + # @abstractmethod |
| 220 | + # def load_nddata(self, data): |
| 221 | + # raise NotImplementedError |
| 222 | + |
| 223 | + # Saving contents of the view and accessing the view |
| 224 | + @abstractmethod |
| 225 | + def save(self, filename): |
| 226 | + raise NotImplementedError |
| 227 | + |
| 228 | + # Marker-related methods |
| 229 | + @abstractmethod |
| 230 | + def start_marking(self): |
| 231 | + raise NotImplementedError |
| 232 | + |
| 233 | + @abstractmethod |
| 234 | + def stop_marking(self): |
| 235 | + raise NotImplementedError |
| 236 | + |
| 237 | + @abstractmethod |
| 238 | + def add_markers(self): |
| 239 | + raise NotImplementedError |
| 240 | + |
| 241 | + @abstractmethod |
| 242 | + def get_markers(self): |
| 243 | + raise NotImplementedError |
| 244 | + |
| 245 | + @abstractmethod |
| 246 | + def remove_markers(self): |
| 247 | + raise NotImplementedError |
| 248 | + |
| 249 | + # @abstractmethod |
| 250 | + # def get_all_markers(self): |
| 251 | + # raise NotImplementedError |
| 252 | + |
| 253 | + # @abstractmethod |
| 254 | + # def get_markers_by_name(self, marker_name=None): |
| 255 | + # raise NotImplementedError |
| 256 | + |
| 257 | + # Methods that modify the view |
| 258 | + @abstractmethod |
| 259 | + def center_on(self): |
| 260 | + raise NotImplementedError |
| 261 | + |
| 262 | + @abstractmethod |
| 263 | + def offset_to(self): |
| 264 | + raise NotImplementedError |
| 265 | + |
| 266 | + @abstractmethod |
| 267 | + def zoom(self): |
| 268 | + raise NotImplementedError |
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