From e443b6315bb5e64f4fbf44db63f512780f37dc99 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Mon, 17 Feb 2025 21:16:20 -0800 Subject: [PATCH 01/12] feat: add implementation --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../base/dists/bradford/pdf/lib/factory.js | 81 +++++++++++++++++ .../base/dists/bradford/pdf/lib/index.js | 54 ++++++++++++ .../stats/base/dists/bradford/pdf/lib/main.js | 86 +++++++++++++++++++ 3 files changed, 221 insertions(+) create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/index.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js new file mode 100644 index 000000000000..4c0bb07def59 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js @@ -0,0 +1,81 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var constantFunction = require( '@stdlib/utils/constant-function' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var ln = require( '@stdlib/math/base/special/ln' ); + + +// MAIN // + +/** +* Returns a function for evaluating the probability density function (PDF) for a bradford distribution with shape parameter `c`. +* +* @param {number} c - shape parameter +* @returns {Function} PDF +* +* @example +* var pdf = factory( 5.0 ); +* var y = pdf( 0.5 ); +* // returns ~0.797 +* +* y = pdf( 1.0 ); +* // returns ~0.465 +*/ +function factory( c ) { + if ( + isnan( c ) || + c <= 0.0 + ) { + return constantFunction( NaN ); + } + return pdf; + + /** + * Evaluates the probability density function (PDF) for a bradford distribution. + * + * @private + * @param {number} x - input value + * @returns {number} evaluated PDF + * + * @example + * var y = pdf( 0.5 ); + * // returns + */ + function pdf( x ) { + var k; + if ( + isnan( x ) || + x < 0.0 || + x > 1.0 + ) { + return NaN; + } + k = ln( 1.0 + c ); + return c / ( ( 1.0 + ( c * x ) ) * k ); + } +} + + +// EXPORTS // + +module.exports = factory; diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/index.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/index.js new file mode 100644 index 000000000000..fd0cb214ab30 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/index.js @@ -0,0 +1,54 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +/** +* Bradford distribution probability density function (PDF). +* +* @module @stdlib/stats/base/dists/bradford/pdf +* +* @example +* var pdf = require( '@stdlib/stats/base/dists/bradford/pdf' ); +* +* var y = pdf( 0.5, 5.0 ); +* // returns ~0.797 +* +* var myPDF = pdf.factory( 5.0 ); +* y = myPDF( 0.5 ); +* // returns ~0.797 +* +* y = myPDF( 1.0 ); +* // returns ~0.465 +*/ + +// MODULES // + +var setReadOnly = require( '@stdlib/utils/define-nonenumerable-read-only-property' ); +var main = require( './main.js' ); +var factory = require( './factory.js' ); + + +// MAIN // + +setReadOnly( main, 'factory', factory ); + + +// EXPORTS // + +module.exports = main; diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js new file mode 100644 index 000000000000..a429202028a0 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js @@ -0,0 +1,86 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var ln = require( '@stdlib/math/base/special/ln' ); + + +// MAIN // + +/** +* Returns the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. +* +* @param {number} x - input value +* @param {number} c - shape parameter +* @returns {number} evaluated PDF +* +* @example +* var v = pdf( 0.1, 0.1 ); +* // returns ~1.039 +* +* @example +* var v = pdf( 0.5, 5.0 ); +* // returns ~0.797 +* +* @example +* var v = pdf( 1.0, 10.0 ); +* // returns ~0.379 +* +* @example +* var v = pdf( 0.5, 0.0 ); +* // returns NaN +* +* @example +* var v = pdf( 2.0, 0.5 ); +* // returns NaN +* +* @example +* var v = pdf( -1.0, 0.5 ); +* // returns NaN +* +* @example +* var v = pdf( NaN, 1.0 ); +* // returns NaN +* +* @example +* var v = pdf( 1.0, NaN ); +* // returns NaN +*/ +function pdf( x, c ) { + var k; + if ( + isnan( c ) || + isnan( x ) || + c <= 0.0 || + x < 0.0 || + x > 1.0 + ) { + return NaN; + } + k = ln( 1.0 + c ); + return c / ( ( 1.0 + ( c * x ) ) * k ); +} + + +// EXPORTS // + +module.exports = pdf; From cef2d060e0250b244dc3478f7e75e592b7bfd05b Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Mon, 17 Feb 2025 21:17:35 -0800 Subject: [PATCH 02/12] feat: add tests --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../pdf/test/fixtures/python/large_c.json | 1 + .../pdf/test/fixtures/python/medium_c.json | 1 + .../pdf/test/fixtures/python/small_c.json | 1 + .../dists/bradford/pdf/test/test.factory.js | 188 ++++++++++++++++++ .../base/dists/bradford/pdf/test/test.js | 38 ++++ .../base/dists/bradford/pdf/test/test.pdf.js | 165 +++++++++++++++ 6 files changed, 394 insertions(+) create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/large_c.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/medium_c.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/small_c.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/large_c.json b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/large_c.json new file mode 100644 index 000000000000..bfd017489aa0 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/large_c.json @@ -0,0 +1 @@ +{"x": [0.0, 0.001001001001001001, 0.002002002002002002, 0.003003003003003003, 0.004004004004004004, 0.005005005005005005, 0.006006006006006006, 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b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js @@ -0,0 +1,188 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var tape = require( 'tape' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var abs = require( '@stdlib/math/base/special/abs' ); +var EPS = require( '@stdlib/constants/float64/eps' ); +var factory = require( './../lib/factory.js' ); + + +// FIXTURES // + +var smallC = require( './fixtures/python/small_c.json' ); +var mediumC = require( './fixtures/python/medium_c.json' ); +var largeC = require( './fixtures/python/large_c.json' ); + + +// TESTS // + +tape( 'main export is a function', function test( t ) { + t.ok( true, __filename ); + t.strictEqual( typeof factory, 'function', 'main export is a function' ); + t.end(); +}); + +tape( 'the function returns a function', function test( t ) { + var pdf = factory( 1.0 ); + t.equal( typeof pdf, 'function', 'returns a function' ); + t.end(); +}); + +tape( 'if provided `NaN` for any parameter, the created function returns `NaN`', function test( t ) { + var pdf; + var y; + + pdf = factory( 1.0 ); + y = pdf( NaN ); + t.equal( isnan( y ), true, 'returns expected value' ); + + pdf = factory( NaN ); + y = pdf( 0.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + pdf = factory( NaN ); + y = pdf( NaN ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided `c <= 0`, the created function always returns `NaN`', function test( t ) { + var pdf; + var y; + + pdf = factory( -1.0 ); + + y = pdf( 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 0.5 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 0.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided a `x` outside of `[0,1]`, the created function always returns `NaN`', function test( t ) { + var pdf; + var y; + + pdf = factory( 1.0 ); + + y = pdf( -1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( -0.5 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 1.5 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 10.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'the created function evaluates the pdf for `x` given small `c`', function test( t ) { + var expected; + var delta; + var pdf; + var tol; + var c; + var i; + var x; + var y; + + expected = smallC.expected; + x = smallC.x; + c = smallC.c; + for ( i = 0; i < x.length; i++ ) { + pdf = factory( c[i] ); + y = pdf( x[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c: '+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 3.9 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); + +tape( 'the created function evaluates the pdf for `x` given a medium `c`', function test( t ) { + var expected; + var delta; + var pdf; + var tol; + var c; + var i; + var x; + var y; + + expected = mediumC.expected; + x = mediumC.x; + c = mediumC.c; + for ( i = 0; i < x.length; i++ ) { + pdf = factory( c[i] ); + y = pdf( x[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c: '+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 1.9 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); + +tape( 'the created function evaluates the pdf for `x` given a large `c`', function test( t ) { + var expected; + var delta; + var pdf; + var tol; + var c; + var i; + var x; + var y; + + expected = largeC.expected; + x = largeC.x; + c = largeC.c; + for ( i = 0; i < x.length; i++ ) { + pdf = factory( c[i] ); + y = pdf( x[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c: '+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 2.0 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.js new file mode 100644 index 000000000000..6e251f419cb8 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.js @@ -0,0 +1,38 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var tape = require( 'tape' ); +var pdf = require( './../lib' ); + + +// TESTS // + +tape( 'main export is a function', function test( t ) { + t.ok( true, __filename ); + t.strictEqual( typeof pdf, 'function', 'main export is a function' ); + t.end(); +}); + +tape( 'attached to the main export is a factory method for generating `pdf` functions', function test( t ) { + t.equal( typeof pdf.factory, 'function', 'exports a factory method' ); + t.end(); +}); diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js new file mode 100644 index 000000000000..ec9864d4fb80 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js @@ -0,0 +1,165 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var tape = require( 'tape' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var abs = require( '@stdlib/math/base/special/abs' ); +var PINF = require( '@stdlib/constants/float64/pinf' ); +var NINF = require( '@stdlib/constants/float64/ninf' ); +var EPS = require( '@stdlib/constants/float64/eps' ); +var pdf = require( './../lib' ); + + +// FIXTURES // + +var smallC = require( './fixtures/python/small_c.json' ); +var mediumC = require( './fixtures/python/medium_c.json' ); +var largeC = require( './fixtures/python/large_c.json' ); + + +// TESTS // + +tape( 'main export is a function', function test( t ) { + t.ok( true, __filename ); + t.strictEqual( typeof pdf, 'function', 'main export is a function' ); + t.end(); +}); + +tape( 'if provided `NaN` for any parameter, the function returns `NaN`', function test( t ) { + var y; + + y = pdf( NaN, 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 0.0, NaN ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided `c <= 0`, the function returns `NaN`', function test( t ) { + var y; + + y = pdf( 0.0, 0.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 0.5, -1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( 1.0, NINF ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided a `x` outside of `[0,1]`, the created function always returns `NaN`', function test( t ) { + var y; + + y = pdf( 2.0, 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( -0.5, 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( NINF, 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + y = pdf( PINF, 1.0 ); + t.equal( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given small parameter `c`', function test( t ) { + var expected; + var delta; + var tol; + var x; + var c; + var y; + var i; + + expected = smallC.expected; + x = smallC.x; + c = smallC.c; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[i], c[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c:'+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 3.9 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given medium parameter `c`', function test( t ) { + var expected; + var delta; + var tol; + var x; + var c; + var y; + var i; + + expected = mediumC.expected; + x = mediumC.x; + c = mediumC.c; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[i], c[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c:'+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 1.9 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given large parameter `c`', function test( t ) { + var expected; + var delta; + var tol; + var x; + var c; + var y; + var i; + + expected = largeC.expected; + x = largeC.x; + c = largeC.c; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[i], c[i] ); + if ( y === expected[i] ) { + t.equal( y, expected[i], 'x: '+x[i]+'. c: '+c[i]+', y: '+y+', expected: '+expected[i] ); + } else { + delta = abs( y - expected[ i ] ); + tol = 2.0 * EPS * abs( expected[ i ] ); + t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); + } + } + t.end(); +}); From f8aa307f9ff3d1295a0b800953a312ee18ac7196 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Mon, 17 Feb 2025 21:18:50 -0800 Subject: [PATCH 03/12] feat: add docs, benchmarks and examples --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: passed - task: lint_repl_help status: passed - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: passed - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: passed - task: lint_python status: passed - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: passed - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../stats/base/dists/bradford/pdf/README.md | 163 ++++++++++++++++++ .../dists/bradford/pdf/benchmark/benchmark.js | 62 +++++++ .../pdf/docs/img/equation_bradford_pdf.svg | 50 ++++++ .../base/dists/bradford/pdf/docs/repl.txt | 69 ++++++++ .../dists/bradford/pdf/docs/types/index.d.ts | 121 +++++++++++++ .../dists/bradford/pdf/docs/types/test.ts | 98 +++++++++++ .../base/dists/bradford/pdf/examples/index.js | 34 ++++ .../base/dists/bradford/pdf/package.json | 69 ++++++++ .../pdf/test/fixtures/python/runner.py | 85 +++++++++ 9 files changed, 751 insertions(+) create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/img/equation_bradford_pdf.svg create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/test.ts create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/runner.py diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md new file mode 100644 index 000000000000..00bacf3ea281 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md @@ -0,0 +1,163 @@ + + +# Probability Density Function + +> [Bradford][bradford-distribution] distribution [probability density function][pdf] (PDF). + +
+ +The [probability density function][pdf] (PDF) for a [bradford][bradford-distribution] random variable is + + + +```math +f(x;c)=\frac{c}{(\ln(1+c)) (1 + cx)} +``` + + + + + +where `c` is the shape parameter of the distribution. The parameters must satisfy `0 <= x <= 1` and `c > 0`. + +
+ + + +
+ +## Usage + +```javascript +var pdf = require( '@stdlib/stats/base/dists/bradford/pdf' ); +``` + +#### pdf( x, c ) + +Evaluates the [probability density function][pdf] (PDF) for a [bradford][bradford-distribution] distribution with shape parameter `c` at a value `x`. + +```javascript +var y = pdf( 0.1, 0.1 ); +// returns ~1.039 + +y = pdf( 0.5, 5.0 ); +// returns ~0.797 + +y = pdf( 1.0, 10.0 ); +// returns ~0.379 +``` + +If provided `NaN` as any argument, the function returns `NaN`. + +```javascript +var y = pdf( NaN, 1.0 ); +// returns NaN + +y = pdf( 0.0, NaN ); +// returns NaN +``` + +If provided an input value `x` outside of the interval `[0,1]`, the function returns `NaN`. + +```javascript +var y = pdf( 2.0, 1.0 ); +// returns NaN + +y = pdf( -0.5, 1.0 ); +// returns NaN +``` + +If provided a shape parameter `c <= 0`, the function returns `NaN`. + +```javascript +var y = pdf( 0.0, 0.0 ); +// returns NaN + +y = pdf( 0.5, -1.0 ); +// returns NaN +``` + +#### pdf.factory( c ) + +Returns a `function` for evaluating the [PDF][pdf] of a [bradford][bradford-distribution] distribution with shape parameter `c`. + +```javascript +var myPDF = pdf.factory( 5.0 ); +var y = myPDF( 0.5 ); +// returns ~0.797 + +y = myPDF( 1.0 ); +// returns ~0.465 +``` + +
+ + + +
+ +## Examples + + + +```javascript +var randu = require( '@stdlib/random/base/randu' ); +var pdf = require( '@stdlib/stats/base/dists/bradford/pdf' ); + +var x; +var c; +var y; +var i; + +for ( i = 0; i < 25; i++ ) { + x = randu(); + c = ( randu()*10.0 ); + y = pdf( x, c ); + console.log( 'x: %d, c: %d, f(x;c): %d', x.toFixed( 4 ), c.toFixed( 4 ), y.toFixed( 4 ) ); +} +``` + +
+ + + + + +
+ +
+ + + + + +
+ +[pdf]: https://en.wikipedia.org/wiki/Probability_density_function + +[bradford-distribution]: https://en.wikipedia.org/wiki/Bradford%27s_law + +
+ + diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js new file mode 100644 index 000000000000..704e6dc825cc --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js @@ -0,0 +1,62 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var bench = require( '@stdlib/bench' ); +var Float64Array = require( '@stdlib/array/float64' ); +var uniform = require( '@stdlib/random/base/uniform' ); +var EPS = require( '@stdlib/constants/float64/eps' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var pkg = require( './../package.json' ).name; +var pdf = require( './../lib' ); + + +// MAIN // + +bench( pkg, function benchmark( b ) { + var len; + var x; + var c; + var y; + var i; + + len = 100; + x = new Float64Array( len ); + c = new Float64Array( len ); + for ( i = 0; i < len; i++ ) { + x[ i ] = uniform( 0.0, 1.0 ); + c[ i ] = uniform( EPS, 10.0 ); + } + + b.tic(); + for ( i = 0; i < b.iterations; i++ ) { + y = pdf( x[ i % len ], c[ i % len ] ); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + } + b.toc(); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + b.pass( 'benchmark finished' ); + b.end(); +}); diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/img/equation_bradford_pdf.svg b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/img/equation_bradford_pdf.svg new file mode 100644 index 000000000000..4edb9d339608 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/img/equation_bradford_pdf.svg @@ -0,0 +1,50 @@ + +f left-parenthesis x semicolon c right-parenthesis equals StartFraction c Over left-parenthesis ln left-parenthesis 1 plus c right-parenthesis right-parenthesis left-parenthesis 1 plus c x right-parenthesis EndFraction + + + \ No newline at end of file diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt new file mode 100644 index 000000000000..e5cd56bca615 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt @@ -0,0 +1,69 @@ + +{{alias}}( x, c ) + Evaluates the probability density function (PDF) for a bradford distribution + with shape parameter `c` at a value `x`. + + If provided `NaN` as any argument, the function returns `NaN`. + + If `x < 0` or `x > 1`, the function returns `NaN`. + + If provided `c <= 0`, the function returns `NaN`. + + Parameters + ---------- + x: number + Input value. + + c: number + Shape parameter. + + Returns + ------- + out: number + Evaluated PDF. + + Examples + -------- + > var y = {{alias}}( 0.1, 0.1 ) + ~1.039 + > y = {{alias}}( 0.5, 5.0 ) + ~0.797 + > y = {{alias}}( 1.0, 10.0 ) + ~0.379 + > y = {{alias}}( 0.5, 0.0 ) + NaN + > y = {{alias}}( 2.0, 0.5 ) + NaN + > y = {{alias}}( -1.0, 0.5 ) + NaN + > y = {{alias}}( NaN, 1.0 ) + NaN + > y = {{alias}}( 1.0, NaN ) + NaN + + +{{alias}}.factory( c ) + Returns a function for evaluating the probability density function (PDF) of + a bradford distribution with shape parameter `c`. + + Parameters + ---------- + c: number + Shape parameter. + + Returns + ------- + pdf: Function + Probability density function (PDF). + + Examples + -------- + > var myPDF = {{alias}}.factory( 5.0 ); + > var y = myPDF( 0.5 ) + ~0.797 + > y = myPDF( 1.0 ) + ~0.465 + + See Also + -------- + diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts new file mode 100644 index 000000000000..79e135263b7a --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts @@ -0,0 +1,121 @@ +/* +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +// TypeScript Version: 4.1 + +/** +* Evaluates the probability density function (PDF) for a bradford distribution. +* +* @param x - input value +* @returns evaluated PDF +*/ +type Unary = ( x: number ) => number; + + +/** +* Interface for the probability density function (PDF) of a bradford distribution. +*/ +interface PDF { + /** + * Evaluates the probability density function (PDF) for a bradford distribution with shape parameter `c` at a value `x`. + * + * ## Notes + * + * - If `x < 0` or `x > 1`, the function returns `NaN`. + * + * - If provided `c <= 0`, the function returns `NaN`. + * + * @param x - input value + * @param c - shape parameter + * @returns evaluated PDF + * + * @example + * var v = pdf( 0.1, 0.1 ); + * // returns ~1.039 + * + * @example + * var v = pdf( 0.5, 5.0 ); + * // returns ~0.797 + * + * @example + * var v = pdf( 1.0, 10.0 ); + * // returns ~0.379 + * + * @example + * var y = pdf( 0.5, 0.0 ); + * // returns NaN + * + * @example + * var y = pdf( 2.0, 0.5 ); + * // returns NaN + * + * @example + * var y = pdf( -1.0, 0.5 ); + * // returns NaN + * + * @example + * var y = pdf( NaN, 1.0 ); + * // returns NaN + * + * @example + * var y = pdf( 1.0, NaN ); + * // returns NaN + */ + ( x: number, c: number ): number; + + /** + * Returns a function for evaluating the probability density function (PDF) for a bradford distribution with shape parameter `c`. + * + * @param c - shape parameter + * @returns PDF + * + * @example + * var mypdf = pdf.factory( 5.0 ); + * var y = mypdf( 0.5 ); + * // returns ~0.797 + * + * y = mypdf( 1.0 ); + * // returns ~0.465 + */ + factory( c: number ): Unary; +} + +/** +* Bradford distribution probability density function (PDF). +* +* @param x - input value +* @param c - shape parameter +* @returns evaluated PDF +* +* @example +* var y = pdf( 0.5, 5.0 ); +* // returns ~0.797 +* +* var mypdf = pdf.factory( 5.0 ); +* y = mypdf( 0.5 ); +* // returns ~0.797 +* +* y = mypdf( 1.0 ); +* // returns ~0.465 +*/ +declare var pdf: PDF; + + +// EXPORTS // + +export = pdf; diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/test.ts b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/test.ts new file mode 100644 index 000000000000..638ceaea88e2 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/test.ts @@ -0,0 +1,98 @@ +/* +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +import pdf = require( './index' ); + + +// TESTS // + +// The function returns a number... +{ + pdf( 0, 1 ); // $ExpectType number + pdf( 1, 5 ); // $ExpectType number +} + +// The compiler throws an error if the function is provided values other than two numbers... +{ + pdf( true, 3 ); // $ExpectError + pdf( false, 2 ); // $ExpectError + pdf( '5', 1 ); // $ExpectError + pdf( [], 1 ); // $ExpectError + pdf( {}, 2 ); // $ExpectError + pdf( ( x: number ): number => x, 2 ); // $ExpectError + + pdf( 9, true ); // $ExpectError + pdf( 9, false ); // $ExpectError + pdf( 5, '5' ); // $ExpectError + pdf( 8, [] ); // $ExpectError + pdf( 9, {} ); // $ExpectError + pdf( 8, ( x: number ): number => x ); // $ExpectError +} + +// The compiler throws an error if the function is provided an unsupported number of arguments... +{ + pdf(); // $ExpectError + pdf( 1 ); // $ExpectError + pdf( 1, 5, 3 ); // $ExpectError +} + +// Attached to main export is a `factory` method which returns a function... +{ + pdf.factory( 5 ); // $ExpectType Unary +} + +// The `factory` method returns a function which returns a number... +{ + const fcn = pdf.factory( 5 ); + fcn( 1 ); // $ExpectType number +} + +// The compiler throws an error if the function returned by the `factory` method is provided invalid arguments... +{ + const fcn = pdf.factory( 5 ); + fcn( true ); // $ExpectError + fcn( false ); // $ExpectError + fcn( '5' ); // $ExpectError + fcn( [] ); // $ExpectError + fcn( {} ); // $ExpectError + fcn( ( x: number ): number => x ); // $ExpectError +} + +// The compiler throws an error if the function returned by the `factory` method is provided an unsupported number of arguments... +{ + const fcn = pdf.factory( 5 ); + fcn(); // $ExpectError + fcn( 2, 0 ); // $ExpectError + fcn( 2, 0, 1 ); // $ExpectError +} + +// The compiler throws an error if the `factory` method is provided values other than one number... +{ + pdf.factory( true ); // $ExpectError + pdf.factory( false ); // $ExpectError + pdf.factory( '5' ); // $ExpectError + pdf.factory( [] ); // $ExpectError + pdf.factory( {} ); // $ExpectError + pdf.factory( ( x: number ): number => x ); // $ExpectError +} + +// The compiler throws an error if the `factory` method is provided an unsupported number of arguments... +{ + pdf.factory( 0, 1 ); // $ExpectError + pdf.factory( 0, 4, 8 ); // $ExpectError +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js new file mode 100644 index 000000000000..5e7d9fdda793 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js @@ -0,0 +1,34 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2025 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +var randu = require( '@stdlib/random/base/randu' ); +var pdf = require( './../lib' ); + +var x; +var c; +var y; +var i; + +for ( i = 0; i < 25; i++ ) { + x = randu(); + c = ( randu()*10.0 ); + y = pdf( x, c ); + console.log( 'x: %d, c: %d, f(x;c): %d', x.toFixed( 4 ), c.toFixed( 4 ), y.toFixed( 4 ) ); +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json new file mode 100644 index 000000000000..53b50afcc931 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json @@ -0,0 +1,69 @@ +{ + "name": "@stdlib/stats/base/dists/bradford/pdf", + "version": "0.0.0", + "description": "Bradford distribution probability density function (PDF).", + "license": "Apache-2.0", + "author": { + "name": "The Stdlib Authors", + "url": "https://github.com/stdlib-js/stdlib/graphs/contributors" + }, + "contributors": [ + { + "name": "The Stdlib Authors", + "url": "https://github.com/stdlib-js/stdlib/graphs/contributors" + } + ], + "main": "./lib", + "directories": { + "benchmark": "./benchmark", + "doc": "./docs", + "example": "./examples", + "lib": "./lib", + "test": "./test" + }, + "types": "./docs/types", + "scripts": {}, + "homepage": "https://github.com/stdlib-js/stdlib", + "repository": { + "type": "git", + "url": "git://github.com/stdlib-js/stdlib.git" + }, + "bugs": { + "url": "https://github.com/stdlib-js/stdlib/issues" + }, + "dependencies": {}, + "devDependencies": {}, + "engines": { + "node": ">=0.10.0", + "npm": ">2.7.0" + }, + "os": [ + "aix", + "darwin", + "freebsd", + "linux", + "macos", + "openbsd", + "sunos", + "win32", + "windows" + ], + "keywords": [ + "stdlib", + "stdmath", + "statistics", + "stats", + "distribution", + "dist", + "bradford", + "bradford-distribution", + "parameter", + "shape-parameter", + "continuous", + "skewed", + "pdf", + "probability", + "density", + "probability-density-function" + ] +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/runner.py b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/runner.py new file mode 100644 index 000000000000..1daf4893200d --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/fixtures/python/runner.py @@ -0,0 +1,85 @@ +#!/usr/bin/env python +# +# @license Apache-2.0 +# +# Copyright (c) 2025 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +"""Generate fixtures.""" + +import os +import json +import numpy as np +from scipy.stats import bradford + +# Get the file path: +FILE = os.path.realpath(__file__) + +# Extract the directory in which this file resides: +DIR = os.path.dirname(FILE) + + +def gen(x, c, name): + """Generate fixture data and write to file. + + # Arguments + + * `x`: domain + * `c`: domain + * `name::str`: output filename + + # Examples + + ``` python + python> x = linspace(0, 1, 2001) + python> c = linspace(0.1, 1000, 2001) + python> gen(x, c, './data.json') + ``` + """ + y = bradford.pdf(x, c) + + # Store data to be written to file as a dictionary: + data = { + "x": x.tolist(), + "c": c.tolist(), + "expected": y.tolist() + } + + # Based on the script directory, create an output filepath: + filepath = os.path.join(DIR, name) + + # Write the data to the output filepath as JSON: + with open(filepath, "w", encoding="utf-8") as outfile: + json.dump(data, outfile) + + +def main(): + """Generate fixture data.""" + x = np.linspace(0, 1, 1000) + + # Small shape parameter: + c = np.linspace(0.1, 1, 1000) + gen(x, c, "small_c.json") + + # Medium shape parameter: + c = np.linspace(1, 10, 1000) + gen(x, c, "medium_c.json") + + # Large shape parameter: + c = np.linspace(10, 100, 1000) + gen(x, c, "large_c.json") + + +if __name__ == "__main__": + main() From 9996a176c5535de42dc3443b3821c1f269b93476 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Mon, 17 Feb 2025 22:35:38 -0800 Subject: [PATCH 04/12] refactor: use log1p instead of ln --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: passed --- --- .../@stdlib/stats/base/dists/bradford/pdf/lib/factory.js | 4 ++-- .../@stdlib/stats/base/dists/bradford/pdf/lib/main.js | 4 ++-- .../stats/base/dists/bradford/pdf/test/test.factory.js | 2 +- .../@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js | 2 +- 4 files changed, 6 insertions(+), 6 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js index 4c0bb07def59..47e4f5db3c3d 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js @@ -22,7 +22,7 @@ var constantFunction = require( '@stdlib/utils/constant-function' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); -var ln = require( '@stdlib/math/base/special/ln' ); +var log1p = require( '@stdlib/math/base/special/log1p' ); // MAIN // @@ -70,7 +70,7 @@ function factory( c ) { ) { return NaN; } - k = ln( 1.0 + c ); + k = log1p( c ); return c / ( ( 1.0 + ( c * x ) ) * k ); } } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js index a429202028a0..8f983518d48a 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js @@ -21,7 +21,7 @@ // MODULES // var isnan = require( '@stdlib/math/base/assert/is-nan' ); -var ln = require( '@stdlib/math/base/special/ln' ); +var log1p = require( '@stdlib/math/base/special/log1p' ); // MAIN // @@ -76,7 +76,7 @@ function pdf( x, c ) { ) { return NaN; } - k = ln( 1.0 + c ); + k = log1p( c ); return c / ( ( 1.0 + ( c * x ) ) * k ); } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js index 2415be181ac8..800fb0b340f5 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js @@ -126,7 +126,7 @@ tape( 'the created function evaluates the pdf for `x` given small `c`', function t.equal( y, expected[i], 'x: '+x[i]+'. c: '+c[i]+', y: '+y+', expected: '+expected[i] ); } else { delta = abs( y - expected[ i ] ); - tol = 3.9 * EPS * abs( expected[ i ] ); + tol = 2.0 * EPS * abs( expected[ i ] ); t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); } } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js index ec9864d4fb80..ebaf74f4d544 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js @@ -107,7 +107,7 @@ tape( 'the function evaluates the pdf for `x` given small parameter `c`', functi t.equal( y, expected[i], 'x: '+x[i]+'. c:'+c[i]+', y: '+y+', expected: '+expected[i] ); } else { delta = abs( y - expected[ i ] ); - tol = 3.9 * EPS * abs( expected[ i ] ); + tol = 2.0 * EPS * abs( expected[ i ] ); t.ok( delta <= tol, 'within tolerance. x: '+x[ i ]+'. c: '+c[i]+'. y: '+y+'. E: '+expected[ i ]+'. Δ: '+delta+'. tol: '+tol+'.' ); } } From 4af00197cbac953aa2b5bbc30bdf1b45e6babceb Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Mon, 17 Feb 2025 23:30:24 -0800 Subject: [PATCH 05/12] fix: case differences --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: na - task: lint_repl_help status: passed - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: passed - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../@stdlib/stats/base/dists/bradford/pdf/README.md | 10 +++++----- .../stats/base/dists/bradford/pdf/docs/repl.txt | 4 ++-- .../base/dists/bradford/pdf/docs/types/index.d.ts | 8 ++++---- .../stats/base/dists/bradford/pdf/lib/factory.js | 4 ++-- 4 files changed, 13 insertions(+), 13 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md index 00bacf3ea281..fac9659f6cbf 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md @@ -24,16 +24,16 @@ limitations under the License.
-The [probability density function][pdf] (PDF) for a [bradford][bradford-distribution] random variable is +The [probability density function][pdf] (PDF) for a [Bradford][bradford-distribution] random variable is - + ```math f(x;c)=\frac{c}{(\ln(1+c)) (1 + cx)} ``` @@ -55,7 +55,7 @@ var pdf = require( '@stdlib/stats/base/dists/bradford/pdf' ); #### pdf( x, c ) -Evaluates the [probability density function][pdf] (PDF) for a [bradford][bradford-distribution] distribution with shape parameter `c` at a value `x`. +Evaluates the [probability density function][pdf] (PDF) for a [Bradford][bradford-distribution] distribution with shape parameter `c` at a value `x`. ```javascript var y = pdf( 0.1, 0.1 ); @@ -100,7 +100,7 @@ y = pdf( 0.5, -1.0 ); #### pdf.factory( c ) -Returns a `function` for evaluating the [PDF][pdf] of a [bradford][bradford-distribution] distribution with shape parameter `c`. +Returns a `function` for evaluating the [PDF][pdf] of a [Bradford][bradford-distribution] distribution with shape parameter `c`. ```javascript var myPDF = pdf.factory( 5.0 ); diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt index e5cd56bca615..7c1bc9302c02 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt @@ -1,6 +1,6 @@ {{alias}}( x, c ) - Evaluates the probability density function (PDF) for a bradford distribution + Evaluates the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. If provided `NaN` as any argument, the function returns `NaN`. @@ -44,7 +44,7 @@ {{alias}}.factory( c ) Returns a function for evaluating the probability density function (PDF) of - a bradford distribution with shape parameter `c`. + a Bradford distribution with shape parameter `c`. Parameters ---------- diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts index 79e135263b7a..54fd670bd838 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts @@ -19,7 +19,7 @@ // TypeScript Version: 4.1 /** -* Evaluates the probability density function (PDF) for a bradford distribution. +* Evaluates the probability density function (PDF) for a Bradford distribution. * * @param x - input value * @returns evaluated PDF @@ -28,11 +28,11 @@ type Unary = ( x: number ) => number; /** -* Interface for the probability density function (PDF) of a bradford distribution. +* Interface for the probability density function (PDF) of a Bradford distribution. */ interface PDF { /** - * Evaluates the probability density function (PDF) for a bradford distribution with shape parameter `c` at a value `x`. + * Evaluates the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. * * ## Notes * @@ -79,7 +79,7 @@ interface PDF { ( x: number, c: number ): number; /** - * Returns a function for evaluating the probability density function (PDF) for a bradford distribution with shape parameter `c`. + * Returns a function for evaluating the probability density function (PDF) for a Bradford distribution with shape parameter `c`. * * @param c - shape parameter * @returns PDF diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js index 47e4f5db3c3d..03f7ca03179e 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js @@ -28,7 +28,7 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); // MAIN // /** -* Returns a function for evaluating the probability density function (PDF) for a bradford distribution with shape parameter `c`. +* Returns a function for evaluating the probability density function (PDF) for a Bradford distribution with shape parameter `c`. * * @param {number} c - shape parameter * @returns {Function} PDF @@ -51,7 +51,7 @@ function factory( c ) { return pdf; /** - * Evaluates the probability density function (PDF) for a bradford distribution. + * Evaluates the probability density function (PDF) for a Bradford distribution. * * @private * @param {number} x - input value From eefcb33ee14cfb8b6eb1e46038247edb8ae7c631 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Wed, 19 Feb 2025 01:56:07 -0800 Subject: [PATCH 06/12] refactor: apply suggestions from PR review --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: passed - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: passed - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../stats/base/dists/bradford/pdf/README.md | 18 ++++++++---------- .../base/dists/bradford/pdf/examples/index.js | 16 +++++++--------- 2 files changed, 15 insertions(+), 19 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md index fac9659f6cbf..cefa7347d734 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md @@ -100,7 +100,7 @@ y = pdf( 0.5, -1.0 ); #### pdf.factory( c ) -Returns a `function` for evaluating the [PDF][pdf] of a [Bradford][bradford-distribution] distribution with shape parameter `c`. +Returns a function for evaluating the [PDF][pdf] of a [Bradford][bradford-distribution] distribution with shape parameter `c`. ```javascript var myPDF = pdf.factory( 5.0 ); @@ -122,19 +122,17 @@ y = myPDF( 1.0 ); ```javascript -var randu = require( '@stdlib/random/base/randu' ); +var uniform = require( '@stdlib/random/array/uniform' ); var pdf = require( '@stdlib/stats/base/dists/bradford/pdf' ); -var x; -var c; +var x = uniform( 10, 0.0, 1.0 ); +var c = uniform( 10, 0.1, 10.0 ); + var y; var i; - -for ( i = 0; i < 25; i++ ) { - x = randu(); - c = ( randu()*10.0 ); - y = pdf( x, c ); - console.log( 'x: %d, c: %d, f(x;c): %d', x.toFixed( 4 ), c.toFixed( 4 ), y.toFixed( 4 ) ); +for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], c[ i ] ); + console.log( 'x: %d, c: %d, f(x;c): %d', x[ i ].toFixed( 4 ), c[ i ].toFixed( 4 ), y.toFixed( 4 ) ); } ``` diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js index 5e7d9fdda793..0b5733eb094c 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/examples/index.js @@ -18,17 +18,15 @@ 'use strict'; -var randu = require( '@stdlib/random/base/randu' ); +var uniform = require( '@stdlib/random/array/uniform' ); var pdf = require( './../lib' ); -var x; -var c; +var x = uniform( 10, 0.0, 1.0 ); +var c = uniform( 10, 0.1, 10.0 ); + var y; var i; - -for ( i = 0; i < 25; i++ ) { - x = randu(); - c = ( randu()*10.0 ); - y = pdf( x, c ); - console.log( 'x: %d, c: %d, f(x;c): %d', x.toFixed( 4 ), c.toFixed( 4 ), y.toFixed( 4 ) ); +for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], c[ i ] ); + console.log( 'x: %d, c: %d, f(x;c): %d', x[ i ].toFixed( 4 ), c[ i ].toFixed( 4 ), y.toFixed( 4 ) ); } From e53463c8fdacbe1e7b1ad45179ca2509d631af48 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Wed, 19 Feb 2025 05:19:42 -0800 Subject: [PATCH 07/12] refactor: use uniform array in benchmarks --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: passed - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../dists/bradford/pdf/benchmark/benchmark.js | 16 ++++------------ 1 file changed, 4 insertions(+), 12 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js index 704e6dc825cc..b89cfeab8025 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js @@ -21,9 +21,7 @@ // MODULES // var bench = require( '@stdlib/bench' ); -var Float64Array = require( '@stdlib/array/float64' ); -var uniform = require( '@stdlib/random/base/uniform' ); -var EPS = require( '@stdlib/constants/float64/eps' ); +var uniform = require( '@stdlib/random/array/uniform' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var pkg = require( './../package.json' ).name; var pdf = require( './../lib' ); @@ -32,23 +30,17 @@ var pdf = require( './../lib' ); // MAIN // bench( pkg, function benchmark( b ) { - var len; var x; var c; var y; var i; - len = 100; - x = new Float64Array( len ); - c = new Float64Array( len ); - for ( i = 0; i < len; i++ ) { - x[ i ] = uniform( 0.0, 1.0 ); - c[ i ] = uniform( EPS, 10.0 ); - } + x = uniform( 100, 0.0, 1.0 ); + c = uniform( 100, 0.1, 10.0 ); b.tic(); for ( i = 0; i < b.iterations; i++ ) { - y = pdf( x[ i % len ], c[ i % len ] ); + y = pdf( x[ i % x.length ], c[ i % c.length ] ); if ( isnan( y ) ) { b.fail( 'should not return NaN' ); } From a4813ba3e9b16680c67f270c307def94e9a19162 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Wed, 19 Feb 2025 05:32:15 -0800 Subject: [PATCH 08/12] bench: add factory benchmarks --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: na - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: passed - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../dists/bradford/pdf/benchmark/benchmark.js | 24 +++++++++++++++++++ 1 file changed, 24 insertions(+) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js index b89cfeab8025..2637daeb4ca3 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/benchmark/benchmark.js @@ -52,3 +52,27 @@ bench( pkg, function benchmark( b ) { b.pass( 'benchmark finished' ); b.end(); }); + +bench( pkg+':factory', function benchmark( b ) { + var mypdf; + var x; + var y; + var i; + + x = uniform( 100, 0.0, 1.0 ); + mypdf = pdf.factory( 5.0 ); + + b.tic(); + for ( i = 0; i < b.iterations; i++ ) { + y = mypdf( x[ i % x.length ] ); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + } + b.toc(); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + b.pass( 'benchmark finished' ); + b.end(); +}); From 5bd5162efc82f90ca567b70240aff2f44fcf7b7e Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Wed, 19 Feb 2025 11:40:06 -0800 Subject: [PATCH 09/12] fix: update implementation to include support for x outside of [0,1] --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: na - task: lint_repl_help status: passed - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: passed - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: passed --- --- .../stats/base/dists/bradford/pdf/README.md | 22 ++++++++--------- .../base/dists/bradford/pdf/docs/repl.txt | 12 ++++++---- .../dists/bradford/pdf/docs/types/index.d.ts | 14 ++++++----- .../base/dists/bradford/pdf/lib/factory.js | 12 ++++++---- .../stats/base/dists/bradford/pdf/lib/main.js | 24 ++++++++++++------- .../dists/bradford/pdf/test/test.factory.js | 12 ++++------ .../base/dists/bradford/pdf/test/test.pdf.js | 10 ++++---- 7 files changed, 58 insertions(+), 48 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md index cefa7347d734..c7c1462ca0d6 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md @@ -39,7 +39,7 @@ f(x;c)=\frac{c}{(\ln(1+c)) (1 + cx)} -where `c` is the shape parameter of the distribution. The parameters must satisfy `0 <= x <= 1` and `c > 0`. +where `c > 0` is the shape parameter of the distribution.
@@ -68,33 +68,33 @@ y = pdf( 1.0, 10.0 ); // returns ~0.379 ``` -If provided `NaN` as any argument, the function returns `NaN`. +If provided a `x` outside the support `[0,1]`, the function returns `0`. ```javascript -var y = pdf( NaN, 1.0 ); -// returns NaN +var y = pdf( 2.0, 1.0 ); +// returns 0.0 -y = pdf( 0.0, NaN ); -// returns NaN +y = pdf( -0.5, 1.0 ); +// returns 0.0 ``` -If provided an input value `x` outside of the interval `[0,1]`, the function returns `NaN`. +If provided `NaN` as any argument, the function returns `NaN`. ```javascript -var y = pdf( 2.0, 1.0 ); +var y = pdf( NaN, 1.0 ); // returns NaN -y = pdf( -0.5, 1.0 ); +y = pdf( 0.0, NaN ); // returns NaN ``` If provided a shape parameter `c <= 0`, the function returns `NaN`. ```javascript -var y = pdf( 0.0, 0.0 ); +var y = pdf( 0.5, 0.0 ); // returns NaN -y = pdf( 0.5, -1.0 ); +y = pdf( 0.5, -5.0 ); // returns NaN ``` diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt index 7c1bc9302c02..2663f8f9f191 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/repl.txt @@ -5,8 +5,6 @@ If provided `NaN` as any argument, the function returns `NaN`. - If `x < 0` or `x > 1`, the function returns `NaN`. - If provided `c <= 0`, the function returns `NaN`. Parameters @@ -30,12 +28,16 @@ ~0.797 > y = {{alias}}( 1.0, 10.0 ) ~0.379 - > y = {{alias}}( 0.5, 0.0 ) - NaN > y = {{alias}}( 2.0, 0.5 ) - NaN + 0.0 > y = {{alias}}( -1.0, 0.5 ) + 0.0 + + > y = {{alias}}( 0.5, 0.0 ) NaN + > y = {{alias}}( 0.5, -5.0 ) + NaN + > y = {{alias}}( NaN, 1.0 ) NaN > y = {{alias}}( 1.0, NaN ) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts index 54fd670bd838..6a8b76c2fa9c 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/docs/types/index.d.ts @@ -36,8 +36,6 @@ interface PDF { * * ## Notes * - * - If `x < 0` or `x > 1`, the function returns `NaN`. - * * - If provided `c <= 0`, the function returns `NaN`. * * @param x - input value @@ -57,15 +55,19 @@ interface PDF { * // returns ~0.379 * * @example - * var y = pdf( 0.5, 0.0 ); - * // returns NaN + * var y = pdf( 2.0, 0.5 ); + * // returns 0.0 * * @example - * var y = pdf( 2.0, 0.5 ); + * var y = pdf( -1.0, 0.5 ); + * // returns 0.0 + * + * @example + * var y = pdf( 0.5, 0.0 ); * // returns NaN * * @example - * var y = pdf( -1.0, 0.5 ); + * var y = pdf( 0.5, -5.0 ); * // returns NaN * * @example diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js index 03f7ca03179e..61c50e69825f 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js @@ -30,7 +30,7 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); /** * Returns a function for evaluating the probability density function (PDF) for a Bradford distribution with shape parameter `c`. * -* @param {number} c - shape parameter +* @param {PositiveNumber} c - shape parameter * @returns {Function} PDF * * @example @@ -55,7 +55,7 @@ function factory( c ) { * * @private * @param {number} x - input value - * @returns {number} evaluated PDF + * @returns {Probability} evaluated PDF * * @example * var y = pdf( 0.5 ); @@ -64,12 +64,14 @@ function factory( c ) { function pdf( x ) { var k; if ( - isnan( x ) || - x < 0.0 || - x > 1.0 + isnan( x ) ) { return NaN; } + if ( x < 0.0 || x > 1.0 ) { + // Support of the Bradford distribution: [0,1] + return 0.0; + } k = log1p( c ); return c / ( ( 1.0 + ( c * x ) ) * k ); } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js index 8f983518d48a..7cec9e20a58c 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js @@ -30,8 +30,8 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); * Returns the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. * * @param {number} x - input value -* @param {number} c - shape parameter -* @returns {number} evaluated PDF +* @param {PositiveNumber} c - shape parameter +* @returns {Probability} evaluated PDF * * @example * var v = pdf( 0.1, 0.1 ); @@ -46,15 +46,19 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); * // returns ~0.379 * * @example -* var v = pdf( 0.5, 0.0 ); -* // returns NaN +* var v = pdf( 2.0, 0.5 ); +* // returns 0.0 * * @example -* var v = pdf( 2.0, 0.5 ); +* var v = pdf( -1.0, 0.5 ); +* // returns 0.0 +* +* @example +* var v = pdf( 0.5, 0.0 ); * // returns NaN * * @example -* var v = pdf( -1.0, 0.5 ); +* var v = pdf( 0.5, -5.0 ); * // returns NaN * * @example @@ -70,12 +74,14 @@ function pdf( x, c ) { if ( isnan( c ) || isnan( x ) || - c <= 0.0 || - x < 0.0 || - x > 1.0 + c <= 0.0 ) { return NaN; } + if ( x < 0.0 || x > 1.0 ) { + // Support of the Bradford distribution: [0,1] + return 0.0; + } k = log1p( c ); return c / ( ( 1.0 + ( c * x ) ) * k ); } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js index 800fb0b340f5..b8332b47e884 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.factory.js @@ -72,7 +72,6 @@ tape( 'if provided `c <= 0`, the created function always returns `NaN`', functio var y; pdf = factory( -1.0 ); - y = pdf( 1.0 ); t.equal( isnan( y ), true, 'returns expected value' ); @@ -85,23 +84,22 @@ tape( 'if provided `c <= 0`, the created function always returns `NaN`', functio t.end(); }); -tape( 'if provided a `x` outside of `[0,1]`, the created function always returns `NaN`', function test( t ) { +tape( 'if provided a valid `c`, the function returns a function which returns `0` when provided a number outside [0,1] for `x`', function test( t ) { var pdf; var y; pdf = factory( 1.0 ); - y = pdf( -1.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( -0.5 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( 1.5 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( 10.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); t.end(); }); diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js index ebaf74f4d544..e9daf89bebd0 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/test/test.pdf.js @@ -71,20 +71,20 @@ tape( 'if provided `c <= 0`, the function returns `NaN`', function test( t ) { t.end(); }); -tape( 'if provided a `x` outside of `[0,1]`, the created function always returns `NaN`', function test( t ) { +tape( 'if provided a number outside [0,1] for `x` and a valid `c`, the function returns `0`', function test( t ) { var y; y = pdf( 2.0, 1.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( -0.5, 1.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( NINF, 1.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); y = pdf( PINF, 1.0 ); - t.equal( isnan( y ), true, 'returns expected value' ); + t.equal( y, 0.0, 'returns expected value' ); t.end(); }); From 85c5fdf4bfcd1b4d357ef677c4d0b7d2e5cb596b Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Wed, 19 Feb 2025 17:16:20 -0800 Subject: [PATCH 10/12] docs: rearrange the description in README --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: passed - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- type: pre_push_report description: Results of running various checks prior to pushing changes. report: - task: run_javascript_examples status: na - task: run_c_examples status: na - task: run_cpp_examples status: na - task: run_javascript_readme_examples status: passed - task: run_c_benchmarks status: na - task: run_cpp_benchmarks status: na - task: run_fortran_benchmarks status: na - task: run_javascript_benchmarks status: na - task: run_julia_benchmarks status: na - task: run_python_benchmarks status: na - task: run_r_benchmarks status: na - task: run_javascript_tests status: na --- --- .../stats/base/dists/bradford/pdf/README.md | 20 +++++++++---------- 1 file changed, 10 insertions(+), 10 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md index c7c1462ca0d6..5051df49a097 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/README.md @@ -68,16 +68,6 @@ y = pdf( 1.0, 10.0 ); // returns ~0.379 ``` -If provided a `x` outside the support `[0,1]`, the function returns `0`. - -```javascript -var y = pdf( 2.0, 1.0 ); -// returns 0.0 - -y = pdf( -0.5, 1.0 ); -// returns 0.0 -``` - If provided `NaN` as any argument, the function returns `NaN`. ```javascript @@ -88,6 +78,16 @@ y = pdf( 0.0, NaN ); // returns NaN ``` +If provided a `x` outside the support `[0,1]`, the function returns `0`. + +```javascript +var y = pdf( 2.0, 1.0 ); +// returns 0.0 + +y = pdf( -0.5, 1.0 ); +// returns 0.0 +``` + If provided a shape parameter `c <= 0`, the function returns `NaN`. ```javascript From af381be3ec88a94201133264bfd47f3a25b21a0e Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Fri, 7 Mar 2025 09:07:17 -0800 Subject: [PATCH 11/12] docs: remove repeated keywords --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: passed - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../@stdlib/stats/base/dists/bradford/pdf/package.json | 6 +----- 1 file changed, 1 insertion(+), 5 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json index 53b50afcc931..1f7c5a51d68b 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/package.json @@ -56,14 +56,10 @@ "distribution", "dist", "bradford", - "bradford-distribution", - "parameter", - "shape-parameter", "continuous", "skewed", "pdf", "probability", - "density", - "probability-density-function" + "density" ] } From 6efb60b4b16ecef4753a742902bffe32c7668413 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Fri, 7 Mar 2025 16:51:47 -0800 Subject: [PATCH 12/12] chore: apply suggestions from review --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: na - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../@stdlib/stats/base/dists/bradford/pdf/lib/factory.js | 6 +++--- .../@stdlib/stats/base/dists/bradford/pdf/lib/main.js | 4 ++-- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js index 61c50e69825f..58006b001abb 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/factory.js @@ -42,12 +42,14 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); * // returns ~0.465 */ function factory( c ) { + var k; if ( isnan( c ) || c <= 0.0 ) { return constantFunction( NaN ); } + k = log1p( c ); return pdf; /** @@ -62,7 +64,6 @@ function factory( c ) { * // returns */ function pdf( x ) { - var k; if ( isnan( x ) ) { @@ -72,8 +73,7 @@ function factory( c ) { // Support of the Bradford distribution: [0,1] return 0.0; } - k = log1p( c ); - return c / ( ( 1.0 + ( c * x ) ) * k ); + return c / ( ( 1.0 + ( c*x ) ) * k ); } } diff --git a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js index 7cec9e20a58c..debecb8de99c 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js +++ b/lib/node_modules/@stdlib/stats/base/dists/bradford/pdf/lib/main.js @@ -27,7 +27,7 @@ var log1p = require( '@stdlib/math/base/special/log1p' ); // MAIN // /** -* Returns the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. +* Evaluates the probability density function (PDF) for a Bradford distribution with shape parameter `c` at a value `x`. * * @param {number} x - input value * @param {PositiveNumber} c - shape parameter @@ -83,7 +83,7 @@ function pdf( x, c ) { return 0.0; } k = log1p( c ); - return c / ( ( 1.0 + ( c * x ) ) * k ); + return c / ( ( 1.0 + ( c*x ) ) * k ); }