Merge branch 'main' into jvmg-patch-1

Author: julianavmgiusti

.github/workflows/releases.yml

@@ -26,7 +26,7 @@ jobs:
         with:
           submodules: true
           fetch-depth: 0
-      - uses: actions/setup-python@v4.2.0
+      - uses: actions/setup-python@v4.3.0
         name: Install Python
         with:
           python-version: '3.8'

.lgtm.yml

@@ -3,10 +3,10 @@ ci:
   autofix_commit_msg: "style: pre-commit fixes"
 default_stages: [commit, push]
 default_language_version:
-  python: python3.9
+  python: python3
 repos:
   - repo: https://github.com/PyCQA/flake8
-    rev: 3.8.2
+    rev: 5.0.4
     hooks:
     - id: flake8
       args: [
@@ -15,16 +15,16 @@ repos:
       exclude: ^(venv/|docs/)
       types: ['python']
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.1.0
+    rev: v2.2.2
     hooks:
       - id: codespell
-        args: ["-L", "ba,ihs,kake,nd,noe,nwo,te"]
+        args: ["-L", "ba,ihs,kake,nd,noe,nwo,te", "-S", "fixture"]
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v2.3.0
+    rev: v4.3.0
     hooks:
     - id: check-yaml
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v0.981
+    rev: v0.982
     hooks:
       - id: mypy
         files: zarr

.pre-commit-config.yaml

@@ -4,7 +4,7 @@ channels:
 dependencies:
   - wheel
   - numcodecs >= 0.6.4
-  - numpy >= 1.7
+  - numpy >= 1.20
   - pip
   - pip:
     - asciitree

environment.yml

@@ -1,5 +1,5 @@
 [build-system]
-requires = ["setuptools>=40.8.0", "setuptools-scm", "wheel"]
+requires = ["setuptools>=64.0.0", "setuptools-scm", "wheel"]
 build-backend = "setuptools.build_meta"
 
 
@@ -13,7 +13,7 @@ maintainers = [
 requires-python = ">=3.8"
 dependencies = [
     'asciitree',
-    'numpy>=1.7',
+    'numpy>=1.20',
     'fasteners',
     'numcodecs>=0.10.0',
 ]

pyproject.toml

@@ -7,11 +7,11 @@ ipywidgets==8.0.2
 # optional library requirements for services
 # don't let pyup change pinning for azure-storage-blob, need to pin to older
 # version to get compatibility with azure storage emulator on appveyor (FIXME)
-azure-storage-blob==12.14.0 # pyup: ignore
+azure-storage-blob==12.14.1 # pyup: ignore
 redis==4.3.4
 types-redis
 types-setuptools
-pymongo==4.2.0
+pymongo==4.3.2
 # optional test requirements
 tox==3.26.0
 coverage