Skip to content
@BU-ISCIII

BU-ISCIII

Pinned Loading

  1. plasmidID plasmidID Public

    PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

    Shell 41 9

  2. viralrecon viralrecon Public

    Forked from nf-core/viralrecon

    Assembly and intrahost/low-frequency variant calling for viral samples

    Nextflow 1 4

  3. iskylims iskylims Public

    is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

    Python 75 39

  4. buisciii-tools buisciii-tools Public

    set of helper tools for bu-isciii management of its core services portfolio.

    Python 2 15

  5. BU-ISCIII BU-ISCIII Public

    Our Wiki and main public documentation repository.

    4 9

  6. taranys taranys Public

    cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.

    Jupyter Notebook 9 4

Repositories

Showing 10 of 71 repositories
  • buisciii-tools Public

    set of helper tools for bu-isciii management of its core services portfolio.

    BU-ISCIII/buisciii-tools’s past year of commit activity
    Python 2 GPL-3.0 15 18 1 Updated Jul 11, 2025
  • relecov-platform Public

    genomic surveillance web platform for respiratory viruses used by RELECOV network in Spain

    BU-ISCIII/relecov-platform’s past year of commit activity
    Python 1 GPL-3.0 9 24 2 Updated Jul 11, 2025
  • relecov-tools Public

    set of helper tools for the assembly of the different elements in the RELECOV platform (Spanish Network for genomic surveillance of SARS-Cov-2) as data download, processing, validation and upload to public databases, as well as analysis runs and database storage.

    BU-ISCIII/relecov-tools’s past year of commit activity
    HTML 7 GPL-3.0 26 19 2 Updated Jul 10, 2025
  • spanish-pathogens-portal Public Forked from ScilifelabDataCentre/node-pathogens-portal

    A minimal/example hugo site for node pathogens portal. Checkout the demo site following the URL below

    BU-ISCIII/spanish-pathogens-portal’s past year of commit activity
    HTML 0 MIT 5 1 0 Updated Jun 26, 2025
  • BU-ISCIII Public

    Our Wiki and main public documentation repository.

    BU-ISCIII/BU-ISCIII’s past year of commit activity
    4 9 2 0 Updated Jun 25, 2025
  • introduction_to_bioinformatics Public

    In this training course you will find theory and practice material for introducing yourself to the basics of high throughput sequencing data analysis.

    BU-ISCIII/introduction_to_bioinformatics’s past year of commit activity
    4 GPL-3.0 6 2 0 Updated Jun 12, 2025
  • iskylims Public

    is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

    BU-ISCIII/iskylims’s past year of commit activity
    Python 75 GPL-3.0 39 19 2 Updated Jun 7, 2025
  • pdn_priority_pathogens Public
    BU-ISCIII/pdn_priority_pathogens’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 28, 2025
  • infectious-diseases-toolkit Public Forked from elixir-europe/infectious-diseases-toolkit

    Infectious diseases toolkit

    BU-ISCIII/infectious-diseases-toolkit’s past year of commit activity
    Python 1 42 0 0 Updated Apr 22, 2025
  • virology_training Public

    This repo contains all the resources needed to follow the virology training to analyze viral sequencing data.

    BU-ISCIII/virology_training’s past year of commit activity
    HTML 4 3 0 0 Updated Apr 9, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…