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  1. CodonBERT CodonBERT Public

    Repository for mRNA Paper and CodonBERT publication.

    Python 128 23

  2. enact-pipeline enact-pipeline Public

    Repository for ENACT pipeline for end-to-end analysis of Visium HD data

    Jupyter Notebook 45 12

  3. spatialone-pipeline spatialone-pipeline Public

    Spatial One

    Python 26 4

  4. LMR-SurfaceID LMR-SurfaceID Public

    Repo contains source code of the SurfaceID paper

    Python 22 4

  5. risk.assessr risk.assessr Public

    Define quality variables for evaluating the risk associated with R packages.

    R 15 2

  6. emrflow emrflow Public

    EMRFlow is designed to simplify the process of running PySpark jobs on Amazon EMR (Elastic Map Reduce).

    Python 14

Repositories

Showing 10 of 37 repositories
  • prodigyprotein Public

    Protein Diversification and Generation through Yielded mutations (Prodigy) Protein is an end-to-end platform for plug and play protein engineering

    Python 0 0 0 0 Updated May 7, 2025
  • causal_survival_analysis Public

    Causal survival analysis

    TeX 1 GPL-3.0 0 0 0 Updated May 7, 2025
  • RiboNN Public

    RiboNN: predicting translation efficiencies from mRNA sequences

    Python 0 0 0 0 Updated May 7, 2025
  • R 2 GPL-3.0 0 0 0 Updated Apr 23, 2025
  • MolQuery Public
    Python 0 0 0 0 Updated Apr 16, 2025
  • enact-pipeline Public

    Repository for ENACT pipeline for end-to-end analysis of Visium HD data

    Jupyter Notebook 45 12 4 1 Updated Apr 14, 2025
  • CImpact Public

    Causal inference library for timeseries analysis

    Python 12 1 0 0 Updated Apr 8, 2025
  • CAP-PLM Public
    Jupyter Notebook 0 0 0 0 Updated Apr 4, 2025
  • Alien Public
    Python 13 2 0 0 Updated Apr 1, 2025
  • PyEvoCell Public
    Python 3 0 0 0 Updated Mar 31, 2025