Search results

Wrong Assignment done with custom database created

Status: Open.

#2140 In benjjneb/dada2;

· Gayubingo opened on Jul 29, 2025

SILVA 132.8 (silva_nr99_v138.2_toGenus_trainset.fa): Candidatus Nitrosoarchaeum labeled as Bacteria

Status: Open.

#2139 In benjjneb/dada2;

· MaryoHg opened on Jul 26, 2025

Best practices for assigning taxonomy 16S v3-v4

Status: Open.

#2138 In benjjneb/dada2;

· liz0f opened on Jul 14, 2025

Interpreting NAs in dada$map + instances when a read is "denoised" into a seemingly random origin?

Status: Open.

#2137 In benjjneb/dada2;

· mtikhonov opened on Jul 13, 2025

[filterAndTrim] maxEE vs read retention

Status: Open.

#2136 In benjjneb/dada2;

· tczinha opened on Jul 8, 2025

A DADA2 workflow for Big Data

Status: Open.

#2133 In benjjneb/dada2;

· agusinac opened on Jul 1, 2025

qualityType option for dada function

Status: Open.

#2131 In benjjneb/dada2;

· mzwyer opened on Jun 26, 2025

Learning Error Rates Step: Unsure of observed vs estimated error rates.

Status: Open.

#2130 In benjjneb/dada2;

· anxious-astrobiologist opened on Jun 25, 2025

Lot of short sequenced chimeras

Status: Open.

#2129 In benjjneb/dada2;

· SRC151 opened on Jun 25, 2025

Two different outputs with assignTaxonomy, while using the same sequences and the same version of UNITE database

Status: Open.

#2127 In benjjneb/dada2;

· lgnolwenn opened on Jun 16, 2025

Question about filtering with unusual sequencing files

Status: Open.

#2126 In benjjneb/dada2;

· saphire35 opened on Jun 13, 2025

Site for IDTAXA is down

Status: Open.

#2125 In benjjneb/dada2;

· mauricebarrett opened on Jun 12, 2025