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src(gates): Use cattrs + attrs #136

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Sep 11, 2022
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4 changes: 3 additions & 1 deletion .vscode/settings.json
Original file line number Diff line number Diff line change
Expand Up @@ -3,5 +3,7 @@
"cellengine",
"cytometry",
"scaleset"
]
],
"python.linting.enabled": true,
"python.linting.flake8Enabled": true
}
22 changes: 22 additions & 0 deletions CONTRIBUTING.md
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@@ -0,0 +1,22 @@
## Contributing

### Running tests

Unit tests run with `python3 -m pytest`.

The integration tests need CellEngine credentials to run. In CI, these are
provided by GitHub secrets. Locally, you need to set environment variables:

```sh
CELLENGINE_USERNAME="..."
CELLENGINE_PASSWORD="..."
# for running tests that require S3:
S3_ACCESS_KEY="..."
S3_SECRET_KEY="..."
# Run the integration tests:
python3 -m pytest ./tests/integration/test_integration.py
```

### Conventions

* Error message text should end with a period.
81 changes: 0 additions & 81 deletions cellengine/payloads/gate.py

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9 changes: 0 additions & 9 deletions cellengine/payloads/gate_utils/__init__.py

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105 changes: 0 additions & 105 deletions cellengine/payloads/gate_utils/ellipse_gate.py

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95 changes: 0 additions & 95 deletions cellengine/payloads/gate_utils/polygon_gate.py

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