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Aug 16, 2023
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9416363
chore(deps-dev): bump prettier from 2.8.7 to 2.8.8
dependabot[bot] Jun 1, 2023
29619da
chore(deps-dev): bump rimraf from 5.0.0 to 5.0.1
dependabot[bot] Jun 1, 2023
cd68f70
ci: make dependabot assign reviewers
dshemetov Jun 28, 2023
b9053fb
Merge pull request #823 from cmu-delphi/ds/dependabot
dshemetov Jun 29, 2023
3f11aa3
Move L. Neureiter from Core to Past members
christymelucci Jun 30, 2023
9bf978e
Merge pull request #824 from cmu-delphi/cmelucci/team-page-update
carlynvandyke Jun 30, 2023
7cd5b95
Update link to pub: A Proposal for Standardized Evaluation...
christymelucci Jul 5, 2023
9b349bd
Merge pull request #830 from cmu-delphi/cmelucci/publication-update
carlynvandyke Jul 7, 2023
b8ee5cc
bug(ci): fix dependabot-assignments
dshemetov Jul 7, 2023
3444edd
bug(ci): remove unused var from dependabot
dshemetov Jul 7, 2023
07d47ef
Update .github/workflows/dependabot-assignments.yml
dshemetov Jul 7, 2023
4e5a12b
Merge pull request #831 from cmu-delphi/ds/dependabot
dshemetov Jul 7, 2023
865e341
bug(ci): dependabot maybe permissions?
dshemetov Jul 7, 2023
6bf9ed5
Merge pull request #833 from cmu-delphi/ds/dependabot
dshemetov Jul 7, 2023
ef8962c
bug(ci): another dependabot attempt
dshemetov Jul 7, 2023
f33f0f8
Merge pull request #834 from cmu-delphi/ds/dependabot
dshemetov Jul 7, 2023
97aa188
bug(ci): use new secret for dependabot
dshemetov Jul 12, 2023
85e6545
Merge pull request #835 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
ac726be
bug(ci): change name to GH_TOKEN for dependabot
dshemetov Jul 12, 2023
304a7cf
Merge pull request #836 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
c5fb652
bug(ci): change scope of GH_TOKEN env???
dshemetov Jul 12, 2023
bbc9595
Merge pull request #837 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
73262fb
bug(ci): pull GH_TOKEN out if conditional?
dshemetov Jul 12, 2023
f088a19
Merge pull request #838 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
a837f5f
bug(ci): use <org>/<team-slug> when assigning
dshemetov Jul 12, 2023
b1ad866
Merge pull request #839 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
fa3346a
chore(deps): bump actions/cache from 3.0.2 to 3.3.1
dependabot[bot] Jul 12, 2023
4f685f5
chore(deps): bump katex from 0.16.4 to 0.16.8
dependabot[bot] Jul 12, 2023
27fca79
refactor(ci): limit dependabot job perm to pull-request
dshemetov Jul 12, 2023
6130ec0
Merge pull request #840 from cmu-delphi/ds/dependabot
dshemetov Jul 12, 2023
8e67919
chore(deps-dev): bump hugo-bin from 0.102.0 to 0.111.2
dependabot[bot] Jul 12, 2023
87552d3
chore(deps): bump mamba-org/provision-with-micromamba from 15 to 16
dependabot[bot] Jul 13, 2023
be8f8fa
Merge pull request #829 from cmu-delphi/dependabot/github_actions/dev…
dshemetov Jul 13, 2023
31c3da9
add api_key to CI env
minhkhul Jul 14, 2023
3f653b0
change env placement
minhkhul Jul 14, 2023
78827e0
test key
minhkhul Jul 14, 2023
f5e39bf
add Sys.getenv to rmd files
minhkhul Jul 16, 2023
6481b63
Update .github/workflows/blog.yaml
minhkhul Jul 17, 2023
873a31d
Merge pull request #843 from cmu-delphi/hide-key
dshemetov Jul 17, 2023
d04a0b2
Update create_release workflow: katie -> george, reviewer -> assignee
krivard Jul 21, 2023
cf43acd
Merge pull request #844 from cmu-delphi/krivard/departure-workflows
krivard Jul 24, 2023
53b86be
Merge pull request #827 from cmu-delphi/dependabot/npm_and_yarn/dev/k…
dshemetov Jul 28, 2023
36826d0
chore(deps): bump uikit from 3.16.15 to 3.16.23
dependabot[bot] Jul 28, 2023
86c08df
Merge pull request #812 from cmu-delphi/dependabot/npm_and_yarn/dev/r…
krivard Jul 28, 2023
35b4c92
Merge pull request #828 from cmu-delphi/dependabot/github_actions/dev…
dshemetov Jul 28, 2023
a9be182
Merge pull request #845 from cmu-delphi/dependabot/npm_and_yarn/dev/u…
dshemetov Jul 28, 2023
e821864
Merge pull request #841 from cmu-delphi/dependabot/npm_and_yarn/dev/h…
dshemetov Jul 28, 2023
8b20d03
Merge pull request #811 from cmu-delphi/dependabot/npm_and_yarn/dev/p…
dshemetov Jul 28, 2023
63d6ec3
chore(deps-dev): bump hugo-bin from 0.111.2 to 0.112.1
dependabot[bot] Aug 1, 2023
6cdcdde
Merge pull request #847 from cmu-delphi/dependabot/npm_and_yarn/dev/h…
nmdefries Aug 1, 2023
d186fff
Move Katie Mazaitis to past members
christymelucci Aug 5, 2023
0ce34ea
Update highlight: Remove Katie, replace w/ Will
christymelucci Aug 5, 2023
e219568
Update content/people/index.md
christymelucci Aug 9, 2023
a89ac34
Merge pull request #850 from cmu-delphi/cmelucci/team-page-update
christymelucci Aug 10, 2023
fa137d3
feat: update to COVIDcast v3.2.7
minhkhul Aug 16, 2023
9cace70
Merge pull request #852 from cmu-delphi/bot/update-covidcast
melange396 Aug 16, 2023
9ada256
chore: release v3.2.5
minhkhul Aug 16, 2023
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6 changes: 4 additions & 2 deletions .github/workflows/blog.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ jobs:
- uses: actions/checkout@v3
with:
fetch-depth: 3
- uses: mamba-org/provision-with-micromamba@v15
- uses: mamba-org/provision-with-micromamba@v16
with:
environment-file: environment.yml
micromamba-version: latest
Expand All @@ -37,7 +37,7 @@ jobs:
run: |
Rscript ./dependencies.R
- name: Restore Blogdown Cache
uses: actions/cache@v3.0.2
uses: actions/cache@v3.3.1
with:
path: |
./blogdown
Expand All @@ -46,6 +46,8 @@ jobs:
${{ runner.os }}-blogdown2-${{ hashFiles('environment.yml') }}-
${{ runner.os }}-blogdown2-
- name: Build site
env:
API_KEY: ${{ secrets.DELPHI_GITHUB_ACTIONS_EPIDATA_API_KEY }}
run: |
npm run build:blog
- uses: actions/upload-artifact@v3
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@ jobs:
- uses: actions/setup-node@v3
with:
node-version: 16
- uses: actions/cache@v3.0.2
- uses: actions/cache@v3.3.1
with:
path: ~/.npm
key: ${{ runner.os }}-node3-${{ hashFiles('**/package-lock.json') }}
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/create_release.yml
Original file line number Diff line number Diff line change
Expand Up @@ -32,7 +32,7 @@ jobs:
base: main
title: Release ${{ steps.version.outputs.next_tag }}
labels: chore
reviewers: krivard
# assignees:
# reviewers:
assignees: melange396
body: |
Releasing ${{ steps.version.outputs.next_tag }}.
17 changes: 17 additions & 0 deletions .github/workflows/dependabot-assignments.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,17 @@
name: Dependabot auto-assign reviewer
on: pull_request

permissions:
pull-requests: write

jobs:
dependabot:
runs-on: ubuntu-latest
env:
GH_TOKEN: ${{ secrets.CMU_DELPHI_AUTOMATION_MACHINE_DEPENDABOT_PAT }}
if: ${{ github.actor == 'dependabot[bot]' }}
steps:
- name: Assign team to PR
run: gh pr edit "$PR_URL" --add-reviewer "cmu-delphi/code-reviewers"
env:
PR_URL: ${{github.event.pull_request.html_url}}
2 changes: 1 addition & 1 deletion .github/workflows/release_main.yml
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,7 @@ jobs:
with:
node-version: 16
- name: Cache Node.js modules
uses: actions/cache@v3.0.2
uses: actions/cache@v3.3.1
with:
path: ~/.npm # npm cache files are stored in `~/.npm` on Linux/macOS
key: ${{ runner.OS }}-node2-${{ hashFiles('**/package-lock.json') }}
Expand Down
2 changes: 1 addition & 1 deletion content/about/publications/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -106,7 +106,7 @@ papers:
- title: "A Proposal for Standardized Evaluation of Epidemiological Models"
image: evaluation.jpg
authors: Rosenfeld, Grefenstette, Burke
link: https://www.cs.cmu.edu/~roni/standardized-evaluation-of-epi-models-rev-09nov2012.pdf
link: https://kilthub.cmu.edu/articles/report/A_Proposal_for_Standardized_Evaluation_of_Epidemiological_Models/21708314
journal: White paper
year: 2012
---
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2020-08-26-fb-survey.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -48,7 +48,7 @@ output:
---

```{r, echo=FALSE}
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))
```

Since April 2020, in collaboration with Facebook,
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2020-10-06-survey-wave-4.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ output:
toc: true
---
```{r, echo=FALSE}
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))
```
Beginning in early April 2020, the `r blogdown::shortcode_html("reflink", "/", "Delphi group")` has
conducted a major survey to track COVID-19 across the United States. With the
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2020-10-14-dv-signal.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,7 @@ library(covidcast)
library(dplyr)
library(ggplot2)
library(gridExtra)
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))

# Fetch DV % CLI signal and USAFacts confirmed case incidence proportion at
# the state level
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2020-12-10-masks-public.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -22,7 +22,7 @@ output:
---

```{r, echo=FALSE}
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))
```

As COVID cases and deaths continue to rise in the United States, we are
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2021-01-15-causal-effect-mobility.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ output:
---

```{r, echo=FALSE}
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))
```

```{r setup, include=FALSE}
Expand Down
2 changes: 1 addition & 1 deletion content/blog/2021-01-22-holiday-surveys.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@ output:
toc: true
---
```{r, echo=FALSE}
options(covidcast.auth = "9328d11cfe46d") # Minh's key
options(covidcast.auth = Sys.getenv("API_KEY"))
```
With pandemic fatigue setting in across the United States after a long year
filled with uncertainty, many felt the temptation to celebrate a “normal”
Expand Down
10 changes: 6 additions & 4 deletions content/people/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -532,11 +532,11 @@ people:
image: kathryn-mazaitis-500x500-min.jpg
affiliation: CMU/MLD
team:
- core
- highlight
- past
- blog
note: Core member, March 2020-July 2023
link: https://cs.cmu.edu/~krivard
description: leads Delphi's engineering team, and is a Principal Research Programmer in the Machine Learning Department at CMU.
description: previously led Delphi's engineering team, and was a Principal Research Programmer in the Machine Learning Department at CMU.
- firstName: Daniel
lastName: McDonald
image: daniel-mcdonald-photo.jpeg
Expand Down Expand Up @@ -594,7 +594,8 @@ people:
image: luke-neureiter.jpg
affiliation: CMU/MLD
team:
- core
- past
note: Core member, March 2022-June 2023
- firstName: Quang
lastName: Nguyen
image: quang-nguyen.jpg
Expand Down Expand Up @@ -852,6 +853,7 @@ people:
affiliation: CMU/Stat
team:
- core
- highlight
- firstName: Dmytro
lastName: Trotsko
image: dmytro-trotsko.jpg
Expand Down
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