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If you run a query like this against the latest Cortex release, started with the single-process config at https://github.com/raw/cortexproject/cortex/master/docs/configuration/single-process-config.yaml:
...then the first result sample should be at timestamp 1595846748.806
, but Cortex reports it at 1595846748.805
, and any subsequent samples are off by 1ms as well. Compare to the result by Prometheus at https://demo.promlabs.com/api/v1/query_range?query=time()&start=1595846748.806&end=1595846848.806&step=5.
I didn't turn on the step alignment middleware, so it shouldn't be related to that.
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