Sort .Rbuildignore

.Rbuildignore

@@ -1,19 +1,19 @@
 ^.*\.Rproj$
+^API$
+^CONTRIBUTING\.md$
+^LICENSE\.md$
+^README\.Rmd$
+^\.Rproj\.user$
 ^\.github$
 ^\.pre-commit-config\.yaml$
 ^\.pre-commit-hooks\.yaml$
-^\.Rproj\.user$
-^API$
-^CONTRIBUTING\.md$
+^_pkgdown\.yml$
 ^cran-comments\.md$
 ^docs$
+^inst/WORDLIST$
 ^inst/hooks/local$
 ^inst/renv-update\.R$
-^inst/WORDLIST$
-^LICENSE\.md$
 ^pkgdown$
-^_pkgdown\.yml$
-^README\.Rmd$
 ^renv$
 ^renv\.lock$
 ^scratch$

.github/workflows/hook-dependencies-upate.yml

@@ -33,12 +33,13 @@ jobs:
           sudo -s eval "$sysreqs"
       - name: update existing packages
         run: |
+          options(repos = c(CRAN = "https://packagemanager.rstudio.com/all/latest"))
           install.packages('renv')
           install.packages('jsonlite')
           renv_deps <- names(jsonlite::read_json('renv.lock')$Packages)
           renv::load()
           renv::restore()
-          can_be_updated <- renv::update(renv_deps)
+          can_be_updated <- renv::update(renv_deps, prompt = FALSE)
           renv::snapshot(packages = renv_deps)
         shell: Rscript {0}
       - name: update dependency graph among packages
@@ -58,7 +59,7 @@ jobs:
             out <- names(renv:::renv_package_dependencies(out))
             return(out)
           }
-
+          options(repos = c(CRAN = "https://packagemanager.rstudio.com/all/latest"))
           options(renv.snapshot.filter = hook_deps)
 
           renv::snapshot(type = "custom", prompt = FALSE)

.github/workflows/hook-tests.yaml

@@ -53,7 +53,7 @@ jobs:
         with:
           path: ~\AppData\Local\renv
           key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('renv.lock') }}
-          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-2-
 
       - name: Install system dependencies (Linux)
         if: runner.os == 'Linux'
@@ -70,8 +70,11 @@ jobs:
           renv::install(getwd(), dependencies = FALSE) 
           # needed to make sure renv is activated in run_test() 
           activate <- c(
-            "if (nzchar(Sys.getenv('R_PRECOMMIT_HOOK_ENV')))",
-            paste0("renv::load('", getwd(), "')")
+            "if (nzchar(Sys.getenv('R_PRECOMMIT_HOOK_ENV'))) {",
+            paste0("  renv::load(\"", getwd(), "\")"),
+            # "  print(renv::status())",
+            "}",
+            "print('R profile activated')"
           )
           writeLines(activate, '~/.Rprofile') 
         shell: Rscript {0}

.pre-commit-config.yaml

@@ -89,22 +89,14 @@ repos:
     -   id: check-added-large-files
     -   id: end-of-file-fixer
         exclude: '\.Rd' # sometimes roxygen fails to generate EOF blank line.
+    -   id: file-contents-sorter
+        files: '^\.Rbuildignore$'
 -   repo: https://github.com/lorenzwalthert/gitignore-tidy
     rev: 65851818058ac40fd8e9640b4dc026e8724c629f
     hooks: 
     -   id: tidy-gitignore
 -   repo: local
     hooks:
-    -   id: install-local
-        name: install-local
-        entry: Rscript -e "renv::deactivate(); devtools::install(dependencies = c('imports', 'depends'))"
-        language: r
-        additional_dependencies:
-        -    callr
-        -    devtools
-        -    renv
-        stages: [push]
-        always_run: True
     -   id: consistent-release-tag
         name: consistent-release-tag
         entry: Rscript inst/hooks/local/consistent-release-tag.R

NEWS.md

@@ -1,5 +1,7 @@
 # precommit 0.2.1.900* (Development version)
 
+* The template `.pre-commit-config.yaml` does now include `file-contents-sorter`
+  to sort `.Rbuildignore` (#366).
 * Port codemeta hook to `language: r` (#350).
 * Don't include `R` as a dependency with 
   `snippet_generate("additional-deps-roxygenize")` (#358).

inst/pre-commit-config-pkg.yaml

@@ -50,6 +50,8 @@ repos:
     hooks: 
     -   id: check-added-large-files
         args: ['--maxkb=200']
+    -   id: file-contents-sorter
+        files: '^\.Rbuildignore$'
     -   id: end-of-file-fixer
         exclude: '\.Rd'
 -   repo: local