REL: 3.1.0

.mailmap

@@ -8,6 +8,7 @@
 # This file is up-to-date if the command git log --format="%aN <%aE>" | sort -u
 # gives no duplicates.
 Alexandre Gramfort <[email protected]> Alexandre Gramfort <[email protected]>
+Anibal Sólon <[email protected]>
 Ariel Rokem <[email protected]> arokem <[email protected]>
 B. Nolan Nichols <[email protected]> Nolan Nichols <[email protected]>
 Basile Pinsard <[email protected]> bpinsard <[email protected]>
@@ -52,8 +53,11 @@ Michael Hanke <[email protected]> <[email protected]>
 Michiel Cottaar <[email protected]> Michiel Cottaar <[email protected]>
 Ly Nguyen <[email protected]> lxn2 <[email protected]>
 Oliver P. Hinds <[email protected]> ohinds <[email protected]>
+Or Duek <[email protected]>
 Oscar Esteban <[email protected]>
 Paul McCarthy <[email protected]> Paul McCarthy <[email protected]>
+Roberto Guidotti <[email protected]>
+Roberto Guidotti <[email protected]> <[email protected]>
 Satrajit Ghosh <[email protected]> Satrajit Ghosh <[email protected]>
 Serge Koudoro <[email protected]> skoudoro <[email protected]>
 Stephan Gerhard <[email protected]> Stephan Gerhard <[email protected]>

.zenodo.json

@@ -28,6 +28,11 @@
     {
       "name": "McCarthy, Paul"
     },
+    {
+      "affiliation": "MIT",
+      "name": "Jarecka, Dorota",
+      "orcid": "0000-0001-8282-2988"
+    },
     {
       "affiliation": "Center for Open Neuroscience, Dartmouth College",
       "name": "Cheng, Christopher P.",
@@ -77,6 +82,17 @@
       "name": "Kastman, Erik",
       "orcid": "0000-0001-7221-9042"
     },
+    {
+      "affiliation": "MIT",
+      "name": "Kaczmarzyk, Jakub",
+      "orcid": "0000-0002-5544-7577"
+    },
+    {
+      "name": "Guidotti, Roberto"
+    },
+    {
+      "name": "Duek, Or"
+    },
     {
       "affiliation": "The University of Washington eScience Institute",
       "name": "Rokem, Ariel",
@@ -96,6 +112,11 @@
       "name": "Goncalves, Mathias",
       "orcid": "0000-0002-7252-7771"
     },
+    {
+      "affiliation": "Montreal Neurological Institute and Hospital",
+      "name": "Markello, Ross",
+      "orcid": "0000-0003-1057-1336"
+    },
     {
       "affiliation": "Department of Psychology, University of California Davis, CA, USA",
       "name": "Riddell, Cameron",
@@ -118,9 +139,7 @@
       "name": "Lepp\u00e4kangas, Jaakko"
     },
     {
-      "affiliation": "Montreal Neurological Institute and Hospital",
-      "name": "Markello, Ross",
-      "orcid": "0000-0003-1057-1336"
+      "name": "S\u00f3lon, Anibal"
     },
     {
       "name": "van den Bosch, Jasper J.F."
@@ -136,11 +155,6 @@
     {
       "name": "Subramaniam, Krish"
     },
-    {
-      "affiliation": "MIT",
-      "name": "Jarecka, Dorota",
-      "orcid": "0000-0001-8282-2988"
-    },
     {
       "affiliation": "Google",
       "name": "Gorgolewski, Krzysztof J.",
@@ -211,11 +225,6 @@
       "name": "Varoquaux, Gael",
       "orcid": "0000-0003-1076-5122"
     },
-    {
-      "affiliation": "MIT",
-      "name": "Kaczmarzyk, Jakub",
-      "orcid": "0000-0002-5544-7577"
-    },
     {
       "affiliation": "Universit\u00e9 de Sherbrooke",
       "name": "Legarreta, Jon Haitz",
@@ -259,6 +268,9 @@
     {
       "name": "Schwartz, Yannick"
     },
+    {
+      "name": "Baratz, Zvi"
+    },
     {
       "affiliation": "Hospital for Sick Children",
       "name": "Darwin, Benjamin C"
@@ -323,9 +335,6 @@
       "name": "Reddam, Venkateswara Reddy",
       "orcid": "0000-0001-6817-2966"
     },
-    {
-      "name": "Baratz, Zvi"
-    },
     {
       "name": "freec84"
     }

Changelog

@@ -21,10 +21,65 @@ Nibabel releases
 Most work on NiBabel so far has been by Matthew Brett (MB), Chris Markiewicz
 (CM), Michael Hanke (MH), Marc-Alexandre Côté (MC), Ben Cipollini (BC), Paul
 McCarthy (PM), Chris Cheng (CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG),
-Eric Larson (EL), Demian Wassermann, and Stephan Gerhard.
+Eric Larson (EL), Demian Wassermann, Stephan Gerhard and Ross Markello (RM).
 
 References like "pr/298" refer to github pull request numbers.
 
+3.1.0 (Monday 20 April 2020)
+============================
+
+New feature release in the 3.1.x series.
+
+New features
+------------
+* Conformation function (``processing.conform``) and CLI tool
+  (``nib-conform``) to apply shape, orientation and zooms (pr/853) (Jakub
+  Kaczmarzyk, reviewed by CM, YOH)
+* Affine rescaling function (``affines.rescale_affine``) to update
+  dimensions and voxel sizes (pr/853) (CM, reviewed by Jakub Kaczmarzyk)
+
+Bug fixes
+---------
+* Delay import of h5py until neded (pr/889) (YOH, reviewed by CM)
+
+Maintenance
+-----------
+* Fix typo in documentation (pr/893) (Zvi Baratz, reviewed by CM)
+* Tests converted from nose to pytest (pr/865 + many sub-PRs)
+  (Dorota Jarecka, Krzyzstof Gorgolewski, Roberto Guidotti, Anibal Solon,
+  and Or Duek)
+
+API changes and deprecations
+----------------------------
+* ``kw_only_meth``/``kw_only_func`` decorators are deprecated (pr/848)
+  (RM, reviewed by CM)
+
+
+2.5.2 (Wednesday 8 April 2020)
+==============================
+
+Bug-fix release in the 2.5.x series. This is an extended-support series,
+providing bug fixes for Python 2.7 and 3.4.
+
+This and all future releases in the 2.5.x series will be incompatible with
+Python 3.9. The last compatible series of numpy and scipy are 1.16.x and
+1.2.x, respectively.
+
+If you are able to upgrade to Python 3, it is recommended to upgrade to
+NiBabel 3.
+
+Bug fixes
+---------
+* Change strings with invalid escapes to raw strings (pr/827) (EL, reviewed
+  by CM)
+* Re-import externals/netcdf.py from scipy to resolve numpy deprecation
+  (pr/821) (CM)
+
+Maintenance
+-----------
+* Set maximum numpy to 1.16.x, maximum scipy to 1.2.x (pr/901) (CM)
+
+
 3.0.2 (Monday 9 March 2020)
 ===========================
 

doc/source/index.rst

@@ -87,6 +87,7 @@ contributed code and discussion (in rough order of appearance):
 * Mathias Goncalves
 * Jakub Kaczmarzyk
 * Dimitri Papadopoulos Orfanos
+* Ross Markello
 * Miguel Estevan Moreno
 * Thomas Roos
 * Igor Solovey
@@ -106,6 +107,9 @@ contributed code and discussion (in rough order of appearance):
 * Chris Gorgolewski
 * Benjamin C Darwin
 * Zvi Baratz
+* Roberto Guidotti
+* Or Duek
+* Anibal Sólon
 
 License reprise
 ===============

doc/source/installation.rst

@@ -83,7 +83,7 @@ Requirements
 
 .. check these against setup.cfg
 
-*  Python_ 3.5.1 or greater
+*  Python_ 3.6 or greater
 *  NumPy_ 1.13 or greater
 *  Packaging_ 14.3 or greater
 *  SciPy_ (optional, for full SPM-ANALYZE support)