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Incorrect identically-labeled DataFrame objects Exception comes with df.compare method #50083

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abhid001 opened this issue Dec 6, 2022 · 5 comments · Fixed by #50287
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Enhancement Error Reporting Incorrect or improved errors from pandas good first issue

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@abhid001
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abhid001 commented Dec 6, 2022

When we have exact same columns in source and target dataframes and distinct number of rows then we are seeing below exception which according to me is misleading.

"ValueError: Can only compare identically-labeled DataFrame objects"

#CODE :

#define DataFrames
df1 = pd.DataFrame({'points': [25, 12, 15, 14],
                   'assists': [5, 7, 13, 12]})

df2 = pd.DataFrame({'points': [25, 12, 15],
                    'assists': [5, 7, 13]})

print(df1)

   points  assists
0      25        5
1      12        7
2      15       13
3      14       12

print(df2)

   points  assists
0      25        5
1      12        7
2      15       13

# Compare both dataframes

df1.compare(df2)

+++++++++++++++++++++++++++++++++ERROR+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Traceback (most recent call last):
  File "<input>", line 1, in <module>
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/frame.py", line 7117, in compare
    keep_equal=keep_equal,
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/generic.py", line 8424, in compare
    mask = ~((self == other) | (self.isna() & other.isna()))
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/ops/common.py", line 69, in new_method
    return method(self, other)
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/arraylike.py", line 32, in __eq__
    return self._cmp_method(other, operator.eq)
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/frame.py", line 6851, in _cmp_method
    self, other = ops.align_method_FRAME(self, other, axis, flex=False, level=None)
  File "/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/pandas/core/ops/__init__.py", line 289, in align_method_FRAME
    "Can only compare identically-labeled DataFrame objects"
ValueError: Can only compare identically-labeled DataFrame objects
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
@rhshadrach
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Thanks for the report; labels can refer to either column labels or row labels.

@rhshadrach rhshadrach added Error Reporting Incorrect or improved errors from pandas Needs Triage Issue that has not been reviewed by a pandas team member labels Dec 6, 2022
@phofl phofl added Enhancement and removed Needs Triage Issue that has not been reviewed by a pandas team member labels Dec 9, 2022
@phofl
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phofl commented Dec 9, 2022

Agreed, the exception is not misleading but could be clearer in the sense that it includes index/columns or both

@abhid001
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abhid001 commented Dec 12, 2022

@rhshadrach Thanks for the confirmation but it would be great if it gives clear idea about the error instead a generic one. Like @phofl said it should include something specific to either column or row labels.
Also i was looking if i can make that enhancement and submit a review request for the same.

@MarcoGorelli
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OK, so how about changing

Can only compare identically-labeled DataFrame objects

to

Can only compare identically-labeled (both index and columns) DataFrame objects

?

This'd need changing in a few places, as well as in tests. But agree that it'd be nice to clarify

@abhid001
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take

mroeschke pushed a commit that referenced this issue Dec 27, 2022
…df.compare method #50083 (#50287)

* added back in changes

* updated whatsnew note

* reworded the whatsnew comment
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