Deblur Error for ITS Data

[afvrbanac]

"Phylogenetic tree cannot be parsed via scikit-biom"

Job ID 986b0182-a8ae-400d-a742-e7228973a5e9

[ackermag]

Antonio has identified this as a bug in qiita.

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On Mon, Mar 19, 2018 at 1:57 PM, Alison Vrbanac ***@***.***> wrote: "Phylogenetic tree cannot be parsed via scikit-biom" Job ID 986b0182-a8ae-400d-a742-e7228973a5e9 — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#2525>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AB69gMTdEK_hJjPfUB9l2i37VZ1BgZ91ks5tgBuvgaJpZM4Sw45b> .

-- Gail Ackermann Knight Lab UCSD glackermann@ucsd.edu <ackermag@ucsd.edu>

[afvrbanac]

Is there a plan to implement a fix for this soon? Just have to decide if I want to wait or do all the processing on barnacle instead :)

Perhaps if there could be an option to not build a tree with deblur?

[antgonza]

Yup, should be ready for next release: either Monday or Wednesday of next week AKA in a week.

[antgonza]

This should be solved in the last deploy. It was tested in the qiitarc system and worked as expected: when nothing hits reference and/or no tree is created, the reference hit artifact is not created but the all is.

[afvrbanac]

Great thanks! I'll give it a go today

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On Wed, Apr 18, 2018 at 8:38 AM, Antonio Gonzalez ***@***.***> wrote: Closed #2525 <#2525>. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#2525 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ATdcUUzR6QgHSnHhjDv-XMo4S6K1tw_Sks5tp130gaJpZM4Sw45b> .