Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
78 changes: 42 additions & 36 deletions app/controllers/DatasetController.scala
Original file line number Diff line number Diff line change
Expand Up @@ -176,42 +176,48 @@ class DatasetController @Inject()(userService: UserService,
// Change output format to return only a compact list with essential information on the datasets
compact: Option[Boolean]
): Action[AnyContent] = sil.UserAwareAction.async { implicit request =>
for {
folderIdValidated <- Fox.runOptional(folderId)(ObjectId.fromString)
uploaderIdValidated <- Fox.runOptional(uploaderId)(ObjectId.fromString)
organizationIdOpt = if (onlyMyOrganization.getOrElse(false))
request.identity.map(_._organization)
else
organizationId
js <- if (compact.getOrElse(false)) {
for {
datasetInfos <- datasetDAO.findAllCompactWithSearch(
isActive,
isUnreported,
organizationIdOpt,
folderIdValidated,
uploaderIdValidated,
searchQuery,
request.identity.map(_._id),
recursive.getOrElse(false),
limitOpt = limit
)
} yield Json.toJson(datasetInfos)
} else {
for {
datasets <- datasetDAO.findAllWithSearch(isActive,
isUnreported,
organizationIdOpt,
folderIdValidated,
uploaderIdValidated,
searchQuery,
recursive.getOrElse(false),
limit) ?~> "dataset.list.failed"
js <- listGrouped(datasets, request.identity) ?~> "dataset.list.failed"
} yield Json.toJson(js)
}
_ = Fox.runOptional(request.identity)(user => userDAO.updateLastActivity(user._id))
} yield addRemoteOriginHeaders(Ok(js))
log() {
for {
folderIdValidated <- Fox.runOptional(folderId)(ObjectId.fromString)
uploaderIdValidated <- Fox.runOptional(uploaderId)(ObjectId.fromString)
organizationIdOpt = if (onlyMyOrganization.getOrElse(false))
request.identity.map(_._organization)
else
organizationId
js <- if (compact.getOrElse(false)) {
for {
datasetInfos <- datasetDAO.findAllCompactWithSearch(
isActive,
isUnreported,
organizationIdOpt,
folderIdValidated,
uploaderIdValidated,
searchQuery,
request.identity.map(_._id),
recursive.getOrElse(false),
limitOpt = limit
)
} yield Json.toJson(datasetInfos)
} else {
for {
_ <- Fox.successful(())
_ = logger.info(
s"Requesting listing datasets with isActive '$isActive', isUnreported '$isUnreported', organizationId '$organizationIdOpt', folderId '$folderIdValidated', uploaderId '$uploaderIdValidated', searchQuery '$searchQuery', recursive '$recursive', limit '$limit'")
datasets <- datasetDAO.findAllWithSearch(isActive,
isUnreported,
organizationIdOpt,
folderIdValidated,
uploaderIdValidated,
searchQuery,
recursive.getOrElse(false),
limit) ?~> "dataset.list.failed" ?~> "Dataset listing failed"
_ = logger.info(s"Found ${datasets.size} datasets successfully")
js <- listGrouped(datasets, request.identity) ?~> "dataset.list.failed" ?~> "Grouping datasets failed"
} yield Json.toJson(js)
}
_ = Fox.runOptional(request.identity)(user => userDAO.updateLastActivity(user._id))
} yield addRemoteOriginHeaders(Ok(js))
}
}

private def listGrouped(datasets: List[Dataset], requestingUser: Option[User])(
Expand Down
14 changes: 9 additions & 5 deletions app/models/dataset/Dataset.scala
Original file line number Diff line number Diff line change
Expand Up @@ -115,12 +115,14 @@ class DatasetDAO @Inject()(sqlClient: SqlClient, datasetLayerDAO: DatasetLayerDA

protected def parse(r: DatasetsRow): Fox[Dataset] =
for {
voxelSize <- parseVoxelSizeOpt(r.voxelsizefactor, r.voxelsizeunit)
voxelSize <- parseVoxelSizeOpt(r.voxelsizefactor, r.voxelsizeunit) ?~> "could not parse dataset voxel size"
defaultViewConfigurationOpt <- Fox.runOptional(r.defaultviewconfiguration)(
JsonHelper.parseAndValidateJson[DatasetViewConfiguration](_))
JsonHelper
.parseAndValidateJson[DatasetViewConfiguration](_)) ?~> "could not parse dataset default view configuration"
adminViewConfigurationOpt <- Fox.runOptional(r.adminviewconfiguration)(
JsonHelper.parseAndValidateJson[DatasetViewConfiguration](_))
metadata <- JsonHelper.parseAndValidateJson[JsArray](r.metadata)
JsonHelper
.parseAndValidateJson[DatasetViewConfiguration](_)) ?~> "could not parse dataset admin view configuration"
metadata <- JsonHelper.parseAndValidateJson[JsArray](r.metadata) ?~> "could not parse dataset metadata"
} yield {
Dataset(
ObjectId(r._Id),
Expand Down Expand Up @@ -218,9 +220,11 @@ class DatasetDAO @Inject()(sqlClient: SqlClient, datasetLayerDAO: DatasetLayerDA
includeSubfolders,
None,
None)
_ = logger.info(s"Requesting datasets with selection predicates '$selectionPredicates'")
limitQuery = limitOpt.map(l => q"LIMIT $l").getOrElse(q"")
_ = logger.info("Requesting datasets with query")
r <- run(q"SELECT $columns FROM $existingCollectionName WHERE $selectionPredicates $limitQuery".as[DatasetsRow])
parsed <- parseAll(r)
parsed <- parseAll(r) ?~> "Parsing datasets failed"
} yield parsed

def findAllCompactWithSearch(isActiveOpt: Option[Boolean] = None,
Expand Down