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Implement Hudson estimator for Fst #292

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tomwhite opened this issue Oct 1, 2020 · 0 comments · Fixed by #302
Closed

Implement Hudson estimator for Fst #292

tomwhite opened this issue Oct 1, 2020 · 0 comments · Fixed by #302

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@tomwhite
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tomwhite commented Oct 1, 2020

This is so we can compare Fst results with scikit-allel.

See #225
@tomwhite tomwhite mentioned this issue Oct 1, 2020
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tomwhite added a commit to tomwhite/sgkit that referenced this issue Oct 5, 2020
@tomwhite
Add hudson estimator to Fst, and make it the default.
8fe669e 
Compute Fst from single divergence matrix which has diversity values on the diagonal.

Fixes sgkit-dev#292
tomwhite added a commit to tomwhite/sgkit that referenced this issue Oct 5, 2020
@tomwhite
Add hudson estimator to Fst, and make it the default.
8053bdc 
Compute Fst from single divergence matrix which has diversity values on the diagonal.

Fixes sgkit-dev#292
@tomwhite tomwhite mentioned this issue Oct 5, 2020
Merged
@mergify mergify bot closed this as completed in #302 Oct 13, 2020
mergify bot pushed a commit that referenced this issue Oct 13, 2020
@tomwhite @mergify
Add hudson estimator to Fst, and make it the default.
9564697 
Compute Fst from single divergence matrix which has diversity values on the diagonal.

Fixes #292
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Add Hudson estimator to Fst, and make it the default tomwhite/sgkit
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@tomwhite