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Achievements

Achievement: Public SponsorAchievement: Pair Extraordinairex3Achievement: StarstruckAchievement: Pull Sharkx4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Public SponsorAchievement: Pair Extraordinairex3Achievement: StarstruckAchievement: Pull Sharkx4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Highlights

Organizations

@Sage-Bionetworks @Sage-Bionetworks-Challenges @nlpsandbox

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tschaffter/README.md

Hello, I'm Thomas!

Project Lead & Principal Research Software Engineer | PhD @ Sage Bionetworks

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tschaffter's github stats

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  1. Sage-Bionetworks/sage-monorepo Public

    ✨ Monorepo for OpenChallenges, Agora, and other open-source apps developed to advance open science and collaborative research.

    TypeScript 26 13

  2. raspberry-pi-kernel-hardened Public

    Cross-compile the Linux kernel for Raspberry Pi with enhanced security in a single command.

    Shell 23 2

  3. nlpsandbox/nlpsandbox-schemas Public

    OpenAPI specifications of the NLP Sandbox services

    2 4

  4. rstudio Public template

    Docker image for analyses using RStudio and Python-Conda

    Dockerfile 16 9

  5. nlpsandbox/phi-deidentifier-app Public

    React client for the NLP Sandbox PHI Deidentifier API

    TypeScript 1 2

  6. genenetweaver Public archive

    GeneNetWeaver (GNW) is an intuitive Java application developed for the generation of in silico benchmarks and the identification of systematic errors of network inference algorithms.

    Java 25 6

862 contributions in the last year

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Activity overview

Contributed to Sage-Bionetworks/sage-monorepo, Sage-Bionetworks-IT/openchallenges, Sage-Bionetworks-IT/organizations-infra and 17 other repositories
Loading A graph representing tschaffter's contributions from May 12, 2024 to May 17, 2025. The contributions are 39% pull requests, 37% commits, 19% code review, 5% issues. 19% Code review 5% Issues 39% Pull requests 37% Commits

Contribution activity

May 2025

Created 44 commits in 2 repositories

Created a pull request in Sage-Bionetworks/sage-monorepo that received 5 comments

chore(sage-monorepo): apply nx migrate latest and fix npm package CVEs

Description Run nx migrate latest to update Nx, Angular and related npm packages. Changelog Run nx migrate latest. Run pnpm audit --audit-level=high…

+2,127 −3,472 lines changed • 5 comments
Opened 41 other pull requests in 2 repositories
Reviewed 19 pull requests in 1 repository
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