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[Installation]: Build from source: Could NOT find Python. Could not build wheels for vllm. #5671

@Brennanzuz

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@Brennanzuz

Your current environment

Building from source fails:

Building wheels for collected packages: vllm
  Building editable for vllm (pyproject.toml) ... error
  error: subprocess-exited-with-error
  
  × Building editable for vllm (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [140 lines of output]
      running editable_wheel
      creating /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info
      writing /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/PKG-INFO
      writing dependency_links to /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/dependency_links.txt
      writing requirements to /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/requires.txt
      writing top-level names to /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/top_level.txt
      writing manifest file '/tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/SOURCES.txt'
      reading manifest file '/tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/SOURCES.txt'
      reading manifest template 'MANIFEST.in'
      adding license file 'LICENSE'
      writing manifest file '/tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm.egg-info/SOURCES.txt'
      creating '/tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm-0.5.0.post1+cu125.dist-info'
      creating /tmp/pip-wheel-7hhn6g95/.tmp-o1qz9bu_/vllm-0.5.0.post1+cu125.dist-info/WHEEL
      running build_py
      running build_ext
      -- The CXX compiler identification is GNU 9.4.0
      -- Detecting CXX compiler ABI info
      -- Detecting CXX compiler ABI info - done
      -- Check for working CXX compiler: /usr/bin/c++ - skipped
      -- Detecting CXX compile features
      -- Detecting CXX compile features - done
      -- Build type: RelWithDebInfo
      -- Target device: cuda
      -- Could NOT find Python (missing: Python_INCLUDE_DIRS Interpreter Development.Module Development.SABIModule)
      CMake Error at cmake/utils.cmake:10 (message):
        Unable to find python matching: /home/jovyan/vllm/venv/bin/python3.11.
      Call Stack (most recent call first):
        CMakeLists.txt:43 (find_python_from_executable)
      
      
      -- Configuring incomplete, errors occurred!
      Traceback (most recent call last):
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 155, in run
          self._create_wheel_file(bdist_wheel)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 357, in _create_wheel_file
          files, mapping = self._run_build_commands(dist_name, unpacked, lib, tmp)
                           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 280, in _run_build_commands
          self._run_build_subcommands()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 307, in _run_build_subcommands
          self.run_command(name)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 316, in run_command
          self.distribution.run_command(command)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 968, in run_command
          super().run_command(command)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/build_ext.py", line 91, in run
          _build_ext.run(self)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/build_ext.py", line 359, in run
          self.build_extensions()
        File "<string>", line 193, in build_extensions
        File "<string>", line 175, in configure
        File "/usr/lib/python3.11/subprocess.py", line 413, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['cmake', '/home/jovyan/vllm', '-G', 'Ninja', '-DCMAKE_BUILD_TYPE=RelWithDebInfo', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/tmp/tmpuiw2gufu.build-lib/vllm', '-DCMAKE_ARCHIVE_OUTPUT_DIRECTORY=/tmp/tmpi_ajv7j6.build-temp', '-DVLLM_TARGET_DEVICE=cuda', '-DCMAKE_CXX_COMPILER_LAUNCHER=ccache', '-DCMAKE_CUDA_COMPILER_LAUNCHER=ccache', '-DVLLM_PYTHON_EXECUTABLE=/home/jovyan/vllm/venv/bin/python3.11', '-DNVCC_THREADS=1', '-DCMAKE_JOB_POOL_COMPILE:STRING=compile', '-DCMAKE_JOB_POOLS:STRING=compile=96']' returned non-zero exit status 1.
      /tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py:988: _DebuggingTips: Problem in editable installation.
      !!
      
              ********************************************************************************
              An error happened while installing `vllm` in editable mode.
      
              The following steps are recommended to help debug this problem:
      
              - Try to install the project normally, without using the editable mode.
                Does the error still persist?
                (If it does, try fixing the problem before attempting the editable mode).
              - If you are using binary extensions, make sure you have all OS-level
                dependencies installed (e.g. compilers, toolchains, binary libraries, ...).
              - Try the latest version of setuptools (maybe the error was already fixed).
              - If you (or your project dependencies) are using any setuptools extension
                or customization, make sure they support the editable mode.
      
              After following the steps above, if the problem still persists and
              you think this is related to how setuptools handles editable installations,
              please submit a reproducible example
              (see https://stackoverflow.com/help/minimal-reproducible-example) to:
      
                  https://github.com/pypa/setuptools/issues
      
              See https://setuptools.pypa.io/en/latest/userguide/development_mode.html for details.
              ********************************************************************************
      
      !!
        cmd_obj.run()
      Traceback (most recent call last):
        File "/home/jovyan/vllm/venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
          main()
        File "/home/jovyan/vllm/venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
                                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/home/jovyan/vllm/venv/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 273, in build_editable
          return hook(wheel_directory, config_settings, metadata_directory)
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 443, in build_editable
          return self._build_with_temp_dir(
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 395, in _build_with_temp_dir
          self.run_setup()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 311, in run_setup
          exec(code, locals())
        File "<string>", line 413, in <module>
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/__init__.py", line 103, in setup
          return distutils.core.setup(**attrs)
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 184, in setup
          return run_commands(dist)
                 ^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 200, in run_commands
          dist.run_commands()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 968, in run_command
          super().run_command(command)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 155, in run
          self._create_wheel_file(bdist_wheel)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 357, in _create_wheel_file
          files, mapping = self._run_build_commands(dist_name, unpacked, lib, tmp)
                           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 280, in _run_build_commands
          self._run_build_subcommands()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/editable_wheel.py", line 307, in _run_build_subcommands
          self.run_command(name)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 316, in run_command
          self.distribution.run_command(command)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 968, in run_command
          super().run_command(command)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/command/build_ext.py", line 91, in run
          _build_ext.run(self)
        File "/tmp/pip-build-env-95v8121y/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/build_ext.py", line 359, in run
          self.build_extensions()
        File "<string>", line 193, in build_extensions
        File "<string>", line 175, in configure
        File "/usr/lib/python3.11/subprocess.py", line 413, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['cmake', '/home/jovyan/vllm', '-G', 'Ninja', '-DCMAKE_BUILD_TYPE=RelWithDebInfo', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/tmp/tmpuiw2gufu.build-lib/vllm', '-DCMAKE_ARCHIVE_OUTPUT_DIRECTORY=/tmp/tmpi_ajv7j6.build-temp', '-DVLLM_TARGET_DEVICE=cuda', '-DCMAKE_CXX_COMPILER_LAUNCHER=ccache', '-DCMAKE_CUDA_COMPILER_LAUNCHER=ccache', '-DVLLM_PYTHON_EXECUTABLE=/home/jovyan/vllm/venv/bin/python3.11', '-DNVCC_THREADS=1', '-DCMAKE_JOB_POOL_COMPILE:STRING=compile', '-DCMAKE_JOB_POOLS:STRING=compile=96']' returned non-zero exit status 1.
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building editable for vllm
Failed to build vllm
ERROR: Could not build wheels for vllm, which is required to install pyproject.toml-based projects

It says that it can't find python3.11, but when I do which python3 it returns the path to the virtual environment I created here.

image

Output of collect_env.py

(venv) (base) root@ngc-pytorch-codeserver-screen-gpu-0:~/vllm# python3.11 collect_env.py
Collecting environment information...
WARNING 06-19 06:09:31 _custom_ops.py:14] Failed to import from vllm._C with ModuleNotFoundError("No module named 'vllm._C'")
PyTorch version: 2.3.0+cu121
Is debug build: False
CUDA used to build PyTorch: 12.1
ROCM used to build PyTorch: N/A

OS: Ubuntu 20.04.6 LTS (x86_64)
GCC version: (Ubuntu 9.4.0-1ubuntu1~20.04.2) 9.4.0
Clang version: Could not collect
CMake version: version 3.29.5
Libc version: glibc-2.31

Python version: 3.11.9 (main, Apr  6 2024, 17:59:24) [GCC 9.4.0] (64-bit runtime)
Python platform: Linux-5.4.0-121-generic-x86_64-with-glibc2.31
Is CUDA available: True
CUDA runtime version: 12.5.40
CUDA_MODULE_LOADING set to: LAZY
GPU models and configuration: GPU 0: NVIDIA A40
Nvidia driver version: 535.161.08
cuDNN version: Probably one of the following:
/usr/lib/x86_64-linux-gnu/libcudnn.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_adv_infer.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_adv_train.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_cnn_infer.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_cnn_train.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_ops_infer.so.8.3.3
/usr/lib/x86_64-linux-gnu/libcudnn_ops_train.so.8.3.3
HIP runtime version: N/A
MIOpen runtime version: N/A
Is XNNPACK available: True

CPU:
Architecture:                    x86_64
CPU op-mode(s):                  32-bit, 64-bit
Byte Order:                      Little Endian
Address sizes:                   43 bits physical, 48 bits virtual
CPU(s):                          96
On-line CPU(s) list:             0-95
Thread(s) per core:              2
Core(s) per socket:              24
Socket(s):                       2
NUMA node(s):                    2
Vendor ID:                       AuthenticAMD
CPU family:                      23
Model:                           49
Model name:                      AMD EPYC 7F72 24-Core Processor
Stepping:                        0
Frequency boost:                 enabled
CPU MHz:                         2198.088
CPU max MHz:                     3200.0000
CPU min MHz:                     2500.0000
BogoMIPS:                        6400.00
Virtualization:                  AMD-V
L1d cache:                       1.5 MiB
L1i cache:                       1.5 MiB
L2 cache:                        24 MiB
L3 cache:                        384 MiB
NUMA node0 CPU(s):               0-23,48-71
NUMA node1 CPU(s):               24-47,72-95
Vulnerability Itlb multihit:     Not affected
Vulnerability L1tf:              Not affected
Vulnerability Mds:               Not affected
Vulnerability Meltdown:          Not affected
Vulnerability Mmio stale data:   Not affected
Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl and seccomp
Vulnerability Spectre v1:        Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:        Mitigation; Retpolines, IBPB conditional, IBRS_FW, STIBP conditional, RSB filling
Vulnerability Srbds:             Not affected
Vulnerability Tsx async abort:   Not affected
Flags:                           fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq monitor ssse3 fma cx16 sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand lahf_lm cmp_legacy svm extapic cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw ibs skinit wdt tce topoext perfctr_core perfctr_nb bpext perfctr_llc mwaitx cpb cat_l3 cdp_l3 hw_pstate sme ssbd mba sev ibrs ibpb stibp vmmcall fsgsbase bmi1 avx2 smep bmi2 cqm rdt_a rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local clzero irperf xsaveerptr wbnoinvd arat npt lbrv svm_lock nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold avic v_vmsave_vmload vgif umip rdpid overflow_recov succor smca

Versions of relevant libraries:
[pip3] numpy==1.26.4
[pip3] nvidia-nccl-cu12==2.20.5
[pip3] torch==2.3.0
[pip3] transformers==4.41.2
[pip3] triton==2.3.0
[conda] magma-cuda110             2.5.2                         5    local
[conda] mkl                       2019.5                      281    conda-forge
[conda] mkl-include               2019.5                      281    conda-forge
[conda] numpy                     1.22.3           py38h05e7239_0    conda-forge
[conda] nvidia-nccl-cu12          2.20.5                   pypi_0    pypi
[conda] pytorch-quantization      2.1.2                    pypi_0    pypi
[conda] torch                     2.3.0                    pypi_0    pypi
[conda] torch-tensorrt            1.1.0a0                  pypi_0    pypi
[conda] torchtext                 0.12.0a0                 pypi_0    pypi
[conda] torchvision               0.13.0a0                 pypi_0    pypi
[conda] transformers              4.41.2                   pypi_0    pypi
[conda] triton                    2.3.0                    pypi_0    pypi
ROCM Version: Could not collect
Neuron SDK Version: N/A
vLLM Version: 0.5.0.post1
vLLM Build Flags:
CUDA Archs: 5.2 6.0 6.1 7.0 7.5 8.0 8.6+PTX; ROCm: Disabled; Neuron: Disabled
GPU Topology:
GPU0    NIC0    NIC1    NIC2    NIC3    CPU Affinity    NUMA Affinity   GPU NUMA ID
GPU0     X      NODE    NODE    NODE    NODE    24-47,72-95     1               N/A
NIC0    NODE     X      PIX     PHB     PHB
NIC1    NODE    PIX      X      PHB     PHB
NIC2    NODE    PHB     PHB      X      PIX
NIC3    NODE    PHB     PHB     PIX      X 

Legend:

  X    = Self
  SYS  = Connection traversing PCIe as well as the SMP interconnect between NUMA nodes (e.g., QPI/UPI)
  NODE = Connection traversing PCIe as well as the interconnect between PCIe Host Bridges within a NUMA node
  PHB  = Connection traversing PCIe as well as a PCIe Host Bridge (typically the CPU)
  PXB  = Connection traversing multiple PCIe bridges (without traversing the PCIe Host Bridge)
  PIX  = Connection traversing at most a single PCIe bridge
  NV#  = Connection traversing a bonded set of # NVLinks

NIC Legend:

  NIC0: mlx5_0
  NIC1: mlx5_1
  NIC2: mlx5_2
  NIC3: mlx5_3

Thank you for your help!

How you are installing vllm

git clone https://github.com/vllm-project/vllm.git
cd vllm
python3.11 -m venv venv
source venv/bin/activate
pip install -e .

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