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Update docker images #87

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Update docker images #87

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alejoe91
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@alejoe91 alejoe91 commented Jul 21, 2025

Python based:

  • combinato: Python 3.12
  • Mountainsort4: Python.3.10
  • Mountainsort5: Python.3.12
  • Tridesclous: Python 3.12, v1.6.9

New:

  • RTSort: Python.3.12 - CUDA12

MATLAB based

  • HDsort: Python.3.12
  • Ironclust: Python.3.12 -CUDA 12
  • WaveClus: Python.3.12
  • Kilosort: COULD NOT RECOMPILE - wrong compatibility of MATLAB vs CUDA versions. Current versions are Python3.10

Won't run with current SpikeInterface version:

  • SpykingCircus
    due to deprecated numpy usage.

@yger can you make a new SC1 release that works with recent numpy versions? Otherwise we should move SC1 to the list of archived sorters: SpikeInterface/spikeinterface#4077

New images still that need to be pushed:

  • combinato
  • HDsort
  • Ironclust
  • Mountainsort4
  • Mountainsort5
  • RT-sort -- wait for new SpikeInterface release, so RTsort is included in the API
  • waveclus
  • tridesclous

@samuelgarcia
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Amlamzing andf ultra tedious work camarade

@yger
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yger commented Jul 28, 2025

What should I do for circus in order to not be considered as archived? I mean, KS is also not working with numpy 2.0 am I right? What is the version of numpy that I should consider, and is it the only requierement? Should I make a release then, such that it could be installed via pip?

@alejoe91
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1.26.4 would work!

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3 participants