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1,350 changes: 1,350 additions & 0 deletions notebooks/multivariate_ssm.ipynb

Large diffs are not rendered by default.

Original file line number Diff line number Diff line change
Expand Up @@ -167,15 +167,19 @@ def populate_component_properties(self):

name_slice = POSITION_DERIVATIVE_NAMES[:k_states]
self.param_names = ["initial_trend"]
self.state_names = [name for name, mask in zip(name_slice, self._order_mask) if mask]
base_names = [name for name, mask in zip(name_slice, self._order_mask) if mask]
self.state_names = [
f"{name}[{obs_name}]" for obs_name in self.observed_state_names for name in base_names
]
self.param_dims = {"initial_trend": ("trend_state",)}
self.coords = {"trend_state": self.state_names}
self.coords = {"trend_state": base_names}

if k_endog > 1:
self.param_dims["trend_state"] = (
"trend_endog",
"trend_state",
)
self.param_dims = {"initial_trend": ("trend_endog", "trend_state")}
self.coords["trend_endog"] = self.observed_state_names

shape = (k_endog, k_states) if k_endog > 1 else (k_states,)
Expand Down
43 changes: 29 additions & 14 deletions pymc_extras/statespace/models/structural/components/regression.py
Original file line number Diff line number Diff line change
Expand Up @@ -28,8 +28,8 @@ def __init__(
super().__init__(
name=name,
k_endog=k_endog,
k_states=k_states,
k_posdef=k_posdef,
k_states=k_states * k_endog,
k_posdef=k_posdef * k_endog,
state_names=self.state_names,
observed_state_names=observed_state_names,
measurement_error=False,
Expand Down Expand Up @@ -59,15 +59,21 @@ def _handle_input_data(self, k_exog: int, state_names: list[str] | None, name) -
return k_exog

def make_symbolic_graph(self) -> None:
betas = self.make_and_register_variable(f"beta_{self.name}", shape=(self.k_states,))
regression_data = self.make_and_register_data(
f"data_{self.name}", shape=(None, self.k_states)
)
k_endog = self.k_endog
k_states = self.k_states // k_endog
self.k_posdef // k_endog

betas = self.make_and_register_variable(f"beta_{self.name}", shape=(k_endog, k_states))
regression_data = self.make_and_register_data(f"data_{self.name}", shape=(None, k_states))

self.ssm["initial_state", :] = betas
self.ssm["transition", :, :] = np.eye(self.k_states)
self.ssm["initial_state", :] = betas.reshape((1, -1)).squeeze()
T = np.eye(k_states)
self.ssm["transition", :, :] = pt.linalg.block_diag(*[T for _ in range(k_endog)])
self.ssm["selection", :, :] = np.eye(self.k_states)
self.ssm["design"] = pt.expand_dims(regression_data, 1)
Z = pt.linalg.block_diag(*[pt.expand_dims(regression_data, 1) for _ in range(k_endog)])
self.ssm["design"] = pt.specify_shape(
Z, (None, k_endog, regression_data.type.shape[1] * k_endog)
)

if self.innovations:
sigma_beta = self.make_and_register_variable(
Expand All @@ -77,29 +83,38 @@ def make_symbolic_graph(self) -> None:
self.ssm["state_cov", row_idx, col_idx] = sigma_beta**2

def populate_component_properties(self) -> None:
k_endog = self.k_endog
k_states = self.k_states // k_endog
self.k_posdef // k_endog

self.shock_names = self.state_names

self.param_names = [f"beta_{self.name}"]
self.data_names = [f"data_{self.name}"]
self.param_dims = {
f"beta_{self.name}": ("exog_state",),
f"beta_{self.name}": ("exog_endog", "exog_state"),
}

base_names = self.state_names
self.state_names = [
f"{name}[{obs_name}]" for obs_name in self.observed_state_names for name in base_names
]

self.param_info = {
f"beta_{self.name}": {
"shape": (self.k_states,),
"shape": (k_endog, k_states),
"constraints": None,
"dims": ("exog_state",),
"dims": ("exog_endog", "exog_state"),
},
}

self.data_info = {
f"data_{self.name}": {
"shape": (None, self.k_states),
"shape": (None, k_states),
"dims": (TIME_DIM, "exog_state"),
},
}
self.coords = {"exog_state": self.state_names}
self.coords = {"exog_state": base_names, "exog_endog": self.observed_state_names}

if self.innovations:
self.param_names += [f"sigma_beta_{self.name}"]
Expand Down